Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SGCEO43556 CROCCP1-201ENST00000426910 5675 ntBASIC15.57■□□□□ 0.08
SGCEO43556 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SGCEO43556 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SGCEO43556 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.57■□□□□ 0.08
SGCEO43556 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SGCEO43556 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.57■□□□□ 0.08
SGCEO43556 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SGCEO43556 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SGCEO43556 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SGCEO43556 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SGCEO43556 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.57■□□□□ 0.08
SGCEO43556 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SGCEO43556 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SGCEO43556 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
SGCEO43556 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SGCEO43556 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.57■□□□□ 0.08
SGCEO43556 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
SGCEO43556 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SGCEO43556 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SGCEO43556 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SGCEO43556 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SGCEO43556 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SGCEO43556 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.57■□□□□ 0.08
SGCEO43556 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SGCEO43556 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SGCEO43556 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.57■□□□□ 0.08
SGCEO43556 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.57■□□□□ 0.08
SGCEO43556 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.57■□□□□ 0.08
SGCEO43556 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
SGCEO43556 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.57■□□□□ 0.08
SGCEO43556 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SGCEO43556 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SGCEO43556 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SGCEO43556 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SGCEO43556 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
SGCEO43556 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SGCEO43556 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SGCEO43556 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.57■□□□□ 0.08
SGCEO43556 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
SGCEO43556 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.57■□□□□ 0.08
SGCEO43556 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SGCEO43556 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SGCEO43556 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SGCEO43556 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SGCEO43556 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SGCEO43556 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SGCEO43556 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.56■□□□□ 0.08
SGCEO43556 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SGCEO43556 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SGCEO43556 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SGCEO43556 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SGCEO43556 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SGCEO43556 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SGCEO43556 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.56■□□□□ 0.08
SGCEO43556 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.56■□□□□ 0.08
SGCEO43556 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.56■□□□□ 0.08
SGCEO43556 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SGCEO43556 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.56■□□□□ 0.08
SGCEO43556 KRT8P26-201ENST00000534154 1276 ntBASIC15.56■□□□□ 0.08
SGCEO43556 AC090616.6-201ENST00000582640 721 ntBASIC15.56■□□□□ 0.08
SGCEO43556 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.56■□□□□ 0.08
SGCEO43556 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.56■□□□□ 0.08
SGCEO43556 AC005332.1-201ENST00000577698 1310 ntBASIC15.56■□□□□ 0.08
SGCEO43556 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.56■□□□□ 0.08
SGCEO43556 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SGCEO43556 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SGCEO43556 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SGCEO43556 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SGCEO43556 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SGCEO43556 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SGCEO43556 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
SGCEO43556 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SGCEO43556 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SGCEO43556 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
SGCEO43556 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.56■□□□□ 0.08
SGCEO43556 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SGCEO43556 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SGCEO43556 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SGCEO43556 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SGCEO43556 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SGCEO43556 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
SGCEO43556 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SGCEO43556 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SGCEO43556 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.55■□□□□ 0.08
SGCEO43556 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SGCEO43556 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SGCEO43556 AL596257.1-201ENST00000641463 2694 ntBASIC15.55■□□□□ 0.08
SGCEO43556 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
SGCEO43556 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SGCEO43556 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SGCEO43556 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SGCEO43556 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SGCEO43556 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SGCEO43556 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.55■□□□□ 0.08
SGCEO43556 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SGCEO43556 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.55■□□□□ 0.08
SGCEO43556 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SGCEO43556 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.55■□□□□ 0.08
SGCEO43556 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms