Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.28■□□□□ 0.04
XRCC2O43543 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.28■□□□□ 0.04
XRCC2O43543 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.28■□□□□ 0.04
XRCC2O43543 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC2O43543 VENTXP7-201ENST00000475503 772 ntBASIC15.28■□□□□ 0.04
XRCC2O43543 AC002558.1-201ENST00000488906 803 ntBASIC15.28■□□□□ 0.04
XRCC2O43543 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.28■□□□□ 0.04
XRCC2O43543 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.28■□□□□ 0.04
XRCC2O43543 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC2O43543 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.28■□□□□ 0.04
XRCC2O43543 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC2O43543 NTF6B-201ENST00000591913 560 ntBASIC15.28■□□□□ 0.04
XRCC2O43543 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.28■□□□□ 0.04
XRCC2O43543 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
XRCC2O43543 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.28■□□□□ 0.04
XRCC2O43543 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC2O43543 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC2O43543 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.28■□□□□ 0.04
XRCC2O43543 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.28■□□□□ 0.04
XRCC2O43543 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC2O43543 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC2O43543 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC2O43543 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.28■□□□□ 0.04
XRCC2O43543 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
XRCC2O43543 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
XRCC2O43543 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
XRCC2O43543 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.27■□□□□ 0.04
XRCC2O43543 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
XRCC2O43543 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
XRCC2O43543 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
XRCC2O43543 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
XRCC2O43543 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
XRCC2O43543 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
XRCC2O43543 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
XRCC2O43543 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.27■□□□□ 0.04
XRCC2O43543 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
XRCC2O43543 AC005332.1-201ENST00000577698 1310 ntBASIC15.27■□□□□ 0.04
XRCC2O43543 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.27■□□□□ 0.04
XRCC2O43543 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.27■□□□□ 0.04
XRCC2O43543 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
XRCC2O43543 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
XRCC2O43543 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
XRCC2O43543 COX5BP2-201ENST00000392354 334 ntBASIC15.27■□□□□ 0.04
XRCC2O43543 AC246785.2-201ENST00000432512 513 ntBASIC15.27■□□□□ 0.04
XRCC2O43543 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.27■□□□□ 0.04
XRCC2O43543 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.27■□□□□ 0.04
XRCC2O43543 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.27■□□□□ 0.04
XRCC2O43543 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.27■□□□□ 0.04
XRCC2O43543 AL353801.3-201ENST00000609898 542 ntBASIC15.27■□□□□ 0.04
XRCC2O43543 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
XRCC2O43543 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
XRCC2O43543 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
XRCC2O43543 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
XRCC2O43543 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
XRCC2O43543 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
XRCC2O43543 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.27■□□□□ 0.03
XRCC2O43543 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
XRCC2O43543 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
XRCC2O43543 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
XRCC2O43543 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.27■□□□□ 0.03
XRCC2O43543 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
XRCC2O43543 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
XRCC2O43543 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
XRCC2O43543 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
XRCC2O43543 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
XRCC2O43543 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
XRCC2O43543 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
XRCC2O43543 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
XRCC2O43543 SIRPAP1-201ENST00000448467 1770 ntBASIC15.26■□□□□ 0.03
XRCC2O43543 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
XRCC2O43543 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
XRCC2O43543 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.26■□□□□ 0.03
XRCC2O43543 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
XRCC2O43543 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.26■□□□□ 0.03
XRCC2O43543 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
XRCC2O43543 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
XRCC2O43543 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
XRCC2O43543 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
XRCC2O43543 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.26■□□□□ 0.03
XRCC2O43543 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
XRCC2O43543 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.26■□□□□ 0.03
XRCC2O43543 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
XRCC2O43543 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
XRCC2O43543 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.26■□□□□ 0.03
XRCC2O43543 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.26■□□□□ 0.03
XRCC2O43543 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
XRCC2O43543 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
XRCC2O43543 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
XRCC2O43543 CHCHD2P8-201ENST00000429873 447 ntBASIC15.26■□□□□ 0.03
XRCC2O43543 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.26■□□□□ 0.03
XRCC2O43543 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.26■□□□□ 0.03
XRCC2O43543 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.26■□□□□ 0.03
XRCC2O43543 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
XRCC2O43543 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.26■□□□□ 0.03
XRCC2O43543 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.26■□□□□ 0.03
XRCC2O43543 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.26■□□□□ 0.03
XRCC2O43543 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
XRCC2O43543 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
XRCC2O43543 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
XRCC2O43543 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms