Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.22■□□□□ 0.03
PHF1O43189 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHF1O43189 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHF1O43189 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHF1O43189 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHF1O43189 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHF1O43189 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PHF1O43189 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.21■□□□□ 0.03
PHF1O43189 Z83836.1-201ENST00000624605 1642 ntBASIC15.21■□□□□ 0.03
PHF1O43189 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PHF1O43189 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PHF1O43189 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PHF1O43189 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.21■□□□□ 0.03
PHF1O43189 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PHF1O43189 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PHF1O43189 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PHF1O43189 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PHF1O43189 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PHF1O43189 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PHF1O43189 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PHF1O43189 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.21■□□□□ 0.03
PHF1O43189 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PHF1O43189 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PHF1O43189 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.21■□□□□ 0.03
PHF1O43189 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.21■□□□□ 0.03
PHF1O43189 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
PHF1O43189 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PHF1O43189 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.21■□□□□ 0.03
PHF1O43189 MIR574-201ENST00000385209 96 ntBASIC15.21■□□□□ 0.03
PHF1O43189 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
PHF1O43189 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.21■□□□□ 0.03
PHF1O43189 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.21■□□□□ 0.03
PHF1O43189 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.21■□□□□ 0.03
PHF1O43189 AC012615.1-201ENST00000565797 1299 ntBASIC15.21■□□□□ 0.03
PHF1O43189 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.21■□□□□ 0.03
PHF1O43189 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PHF1O43189 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PHF1O43189 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PHF1O43189 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PHF1O43189 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PHF1O43189 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
PHF1O43189 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PHF1O43189 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.21■□□□□ 0.03
PHF1O43189 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PHF1O43189 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.21■□□□□ 0.02
PHF1O43189 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
PHF1O43189 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
PHF1O43189 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.21■□□□□ 0.02
PHF1O43189 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PHF1O43189 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.21■□□□□ 0.02
PHF1O43189 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.21■□□□□ 0.02
PHF1O43189 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PHF1O43189 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PHF1O43189 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PHF1O43189 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PHF1O43189 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.2■□□□□ 0.02
PHF1O43189 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PHF1O43189 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PHF1O43189 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.2■□□□□ 0.02
PHF1O43189 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PHF1O43189 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PHF1O43189 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PHF1O43189 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.2■□□□□ 0.02
PHF1O43189 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PHF1O43189 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PHF1O43189 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PHF1O43189 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.2■□□□□ 0.02
PHF1O43189 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PHF1O43189 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PHF1O43189 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.2■□□□□ 0.02
PHF1O43189 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PHF1O43189 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PHF1O43189 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PHF1O43189 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.2■□□□□ 0.02
PHF1O43189 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PHF1O43189 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.2■□□□□ 0.02
PHF1O43189 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.2■□□□□ 0.02
PHF1O43189 DRAXINP1-201ENST00000437611 948 ntBASIC15.2■□□□□ 0.02
PHF1O43189 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.2■□□□□ 0.02
PHF1O43189 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.2■□□□□ 0.02
PHF1O43189 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.2■□□□□ 0.02
PHF1O43189 TPSP2-201ENST00000561760 610 ntBASIC15.2■□□□□ 0.02
PHF1O43189 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.2■□□□□ 0.02
PHF1O43189 AC024563.2-201ENST00000603282 481 ntBASIC15.2■□□□□ 0.02
PHF1O43189 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PHF1O43189 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PHF1O43189 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PHF1O43189 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PHF1O43189 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.2■□□□□ 0.02
PHF1O43189 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PHF1O43189 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.2■□□□□ 0.02
PHF1O43189 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PHF1O43189 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PHF1O43189 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PHF1O43189 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PHF1O43189 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PHF1O43189 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PHF1O43189 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PHF1O43189 AC009102.3-201ENST00000623118 1491 ntBASIC15.2■□□□□ 0.02
PHF1O43189 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms