Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PFDN6O15212 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PFDN6O15212 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PFDN6O15212 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.61■□□□□ 0.41
PFDN6O15212 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.61■□□□□ 0.41
PFDN6O15212 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PFDN6O15212 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PFDN6O15212 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.61■□□□□ 0.41
PFDN6O15212 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PFDN6O15212 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PFDN6O15212 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PFDN6O15212 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PFDN6O15212 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PFDN6O15212 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PFDN6O15212 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.61■□□□□ 0.41
PFDN6O15212 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PFDN6O15212 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PFDN6O15212 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PFDN6O15212 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.61■□□□□ 0.41
PFDN6O15212 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
PFDN6O15212 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.61■□□□□ 0.41
PFDN6O15212 AL592071.1-201ENST00000611956 408 ntBASIC17.61■□□□□ 0.41
PFDN6O15212 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.61■□□□□ 0.41
PFDN6O15212 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PFDN6O15212 FER1L4-210ENST00000615531 5998 ntBASIC17.61■□□□□ 0.41
PFDN6O15212 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
PFDN6O15212 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PFDN6O15212 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
PFDN6O15212 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PFDN6O15212 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PFDN6O15212 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PFDN6O15212 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PFDN6O15212 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.6■□□□□ 0.41
PFDN6O15212 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PFDN6O15212 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PFDN6O15212 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN6O15212 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PFDN6O15212 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN6O15212 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN6O15212 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN6O15212 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN6O15212 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.6■□□□□ 0.41
PFDN6O15212 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
PFDN6O15212 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN6O15212 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN6O15212 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN6O15212 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.6■□□□□ 0.41
PFDN6O15212 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN6O15212 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.6■□□□□ 0.41
PFDN6O15212 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.6■□□□□ 0.41
PFDN6O15212 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.6■□□□□ 0.41
PFDN6O15212 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.6■□□□□ 0.41
PFDN6O15212 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN6O15212 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN6O15212 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.6■□□□□ 0.41
PFDN6O15212 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN6O15212 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.6■□□□□ 0.41
PFDN6O15212 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.6■□□□□ 0.41
PFDN6O15212 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN6O15212 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN6O15212 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN6O15212 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.6■□□□□ 0.41
PFDN6O15212 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN6O15212 AC011270.2-201ENST00000624293 2550 ntBASIC17.6■□□□□ 0.41
PFDN6O15212 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
PFDN6O15212 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN6O15212 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN6O15212 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PFDN6O15212 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PFDN6O15212 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PFDN6O15212 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PFDN6O15212 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.59■□□□□ 0.41
PFDN6O15212 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
PFDN6O15212 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.59■□□□□ 0.41
PFDN6O15212 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.59■□□□□ 0.41
PFDN6O15212 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PFDN6O15212 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PFDN6O15212 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PFDN6O15212 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PFDN6O15212 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PFDN6O15212 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
PFDN6O15212 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PFDN6O15212 AC005104.2-201ENST00000427818 678 ntBASIC17.59■□□□□ 0.41
PFDN6O15212 AC246785.2-201ENST00000432512 513 ntBASIC17.59■□□□□ 0.41
PFDN6O15212 RN7SL606P-201ENST00000472779 293 ntBASIC17.59■□□□□ 0.41
PFDN6O15212 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.59■□□□□ 0.41
PFDN6O15212 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PFDN6O15212 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.59■□□□□ 0.41
PFDN6O15212 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PFDN6O15212 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.59■□□□□ 0.41
PFDN6O15212 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.59■□□□□ 0.41
PFDN6O15212 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PFDN6O15212 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PFDN6O15212 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PFDN6O15212 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.59■□□□□ 0.41
PFDN6O15212 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PFDN6O15212 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PFDN6O15212 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PFDN6O15212 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PFDN6O15212 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms