Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TLR4O00206 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TLR4O00206 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TLR4O00206 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TLR4O00206 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TLR4O00206 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TLR4O00206 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TLR4O00206 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TLR4O00206 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TLR4O00206 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TLR4O00206 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TLR4O00206 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.38■□□□□ 0.37
TLR4O00206 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TLR4O00206 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TLR4O00206 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TLR4O00206 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TLR4O00206 AL049757.1-201ENST00000616842 1596 ntBASIC17.38■□□□□ 0.37
TLR4O00206 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TLR4O00206 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TLR4O00206 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TLR4O00206 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
TLR4O00206 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TLR4O00206 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TLR4O00206 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.38■□□□□ 0.37
TLR4O00206 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TLR4O00206 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TLR4O00206 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.38■□□□□ 0.37
TLR4O00206 GPX1P2-201ENST00000429271 606 ntBASIC17.38■□□□□ 0.37
TLR4O00206 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
TLR4O00206 AC112482.1-201ENST00000492080 688 ntBASIC17.38■□□□□ 0.37
TLR4O00206 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.38■□□□□ 0.37
TLR4O00206 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.38■□□□□ 0.37
TLR4O00206 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.38■□□□□ 0.37
TLR4O00206 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TLR4O00206 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.38■□□□□ 0.37
TLR4O00206 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.38■□□□□ 0.37
TLR4O00206 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.38■□□□□ 0.37
TLR4O00206 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.38■□□□□ 0.37
TLR4O00206 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TLR4O00206 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TLR4O00206 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
TLR4O00206 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TLR4O00206 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TLR4O00206 AL096828.2-201ENST00000567259 1965 ntBASIC17.38■□□□□ 0.37
TLR4O00206 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TLR4O00206 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.38■□□□□ 0.37
TLR4O00206 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
TLR4O00206 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TLR4O00206 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.38■□□□□ 0.37
TLR4O00206 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TLR4O00206 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.37■□□□□ 0.37
TLR4O00206 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TLR4O00206 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
TLR4O00206 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.37■□□□□ 0.37
TLR4O00206 HTR7P1-202ENST00000624664 4411 ntBASIC17.37■□□□□ 0.37
TLR4O00206 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TLR4O00206 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TLR4O00206 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TLR4O00206 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TLR4O00206 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TLR4O00206 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TLR4O00206 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.37■□□□□ 0.37
TLR4O00206 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TLR4O00206 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.37■□□□□ 0.37
TLR4O00206 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.37■□□□□ 0.37
TLR4O00206 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.37■□□□□ 0.37
TLR4O00206 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.37■□□□□ 0.37
TLR4O00206 AC108751.1-201ENST00000490852 363 ntBASIC17.37■□□□□ 0.37
TLR4O00206 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
TLR4O00206 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TLR4O00206 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.37■□□□□ 0.37
TLR4O00206 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.37■□□□□ 0.37
TLR4O00206 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TLR4O00206 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TLR4O00206 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.37■□□□□ 0.37
TLR4O00206 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TLR4O00206 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TLR4O00206 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TLR4O00206 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TLR4O00206 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TLR4O00206 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TLR4O00206 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TLR4O00206 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TLR4O00206 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TLR4O00206 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.36■□□□□ 0.37
TLR4O00206 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.36■□□□□ 0.37
TLR4O00206 AC132938.5-201ENST00000624980 1813 ntBASIC17.36■□□□□ 0.37
TLR4O00206 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TLR4O00206 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.36■□□□□ 0.37
TLR4O00206 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TLR4O00206 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.36■□□□□ 0.37
TLR4O00206 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.36■□□□□ 0.37
TLR4O00206 AC004832.2-201ENST00000426397 482 ntBASIC17.36■□□□□ 0.37
TLR4O00206 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.36■□□□□ 0.37
TLR4O00206 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.36■□□□□ 0.37
TLR4O00206 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.36■□□□□ 0.37
TLR4O00206 AC002347.1-201ENST00000569543 541 ntBASIC17.36■□□□□ 0.37
TLR4O00206 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.36■□□□□ 0.37
TLR4O00206 AC004706.3-202ENST00000621574 984 ntBASIC17.36■□□□□ 0.37
TLR4O00206 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms