Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM88BA6NKF7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM88BA6NKF7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM88BA6NKF7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM88BA6NKF7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.2■□□□□ 0.82
TMEM88BA6NKF7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.2■□□□□ 0.82
TMEM88BA6NKF7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM88BA6NKF7 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM88BA6NKF7 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM88BA6NKF7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM88BA6NKF7 AL512384.1-201ENST00000406683 331 ntBASIC20.2■□□□□ 0.82
TMEM88BA6NKF7 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC20.2■□□□□ 0.82
TMEM88BA6NKF7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM88BA6NKF7 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM88BA6NKF7 LY6E-204ENST00000519546 971 ntTSL 2 BASIC20.2■□□□□ 0.82
TMEM88BA6NKF7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC20.2■□□□□ 0.82
TMEM88BA6NKF7 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM88BA6NKF7 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM88BA6NKF7 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
TMEM88BA6NKF7 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC20.2■□□□□ 0.82
TMEM88BA6NKF7 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM88BA6NKF7 AC106886.1-201ENST00000568660 600 ntBASIC20.2■□□□□ 0.82
TMEM88BA6NKF7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.2■□□□□ 0.82
TMEM88BA6NKF7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.2■□□□□ 0.82
TMEM88BA6NKF7 AL049812.1-201ENST00000432563 2267 ntBASIC20.2■□□□□ 0.82
TMEM88BA6NKF7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM88BA6NKF7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM88BA6NKF7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM88BA6NKF7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC20.19■□□□□ 0.82
TMEM88BA6NKF7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM88BA6NKF7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM88BA6NKF7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.19■□□□□ 0.82
TMEM88BA6NKF7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM88BA6NKF7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM88BA6NKF7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM88BA6NKF7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM88BA6NKF7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC20.19■□□□□ 0.82
TMEM88BA6NKF7 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM88BA6NKF7 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC20.19■□□□□ 0.82
TMEM88BA6NKF7 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC20.19■□□□□ 0.82
TMEM88BA6NKF7 KRT17P8-201ENST00000540749 863 ntBASIC20.19■□□□□ 0.82
TMEM88BA6NKF7 RAB43P1-201ENST00000561790 589 ntBASIC20.19■□□□□ 0.82
TMEM88BA6NKF7 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC20.19■□□□□ 0.82
TMEM88BA6NKF7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.19■□□□□ 0.82
TMEM88BA6NKF7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.19■□□□□ 0.82
TMEM88BA6NKF7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TMEM88BA6NKF7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM88BA6NKF7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
TMEM88BA6NKF7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TMEM88BA6NKF7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM88BA6NKF7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.19■□□□□ 0.82
TMEM88BA6NKF7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.19■□□□□ 0.82
TMEM88BA6NKF7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM88BA6NKF7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TMEM88BA6NKF7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM88BA6NKF7 BX276092.7-203ENST00000637198 1536 ntBASIC20.18■□□□□ 0.82
TMEM88BA6NKF7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM88BA6NKF7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM88BA6NKF7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.18■□□□□ 0.82
TMEM88BA6NKF7 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM88BA6NKF7 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC20.18■□□□□ 0.82
TMEM88BA6NKF7 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM88BA6NKF7 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC20.18■□□□□ 0.82
TMEM88BA6NKF7 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC20.18■□□□□ 0.82
TMEM88BA6NKF7 FAM8A2P-201ENST00000528813 1142 ntBASIC20.18■□□□□ 0.82
TMEM88BA6NKF7 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM88BA6NKF7 POLE2-203ENST00000553805 496 ntTSL 2 BASIC20.18■□□□□ 0.82
TMEM88BA6NKF7 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC20.18■□□□□ 0.82
TMEM88BA6NKF7 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TMEM88BA6NKF7 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TMEM88BA6NKF7 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC20.18■□□□□ 0.82
TMEM88BA6NKF7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM88BA6NKF7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM88BA6NKF7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.18■□□□□ 0.82
TMEM88BA6NKF7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM88BA6NKF7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC20.18■□□□□ 0.82
TMEM88BA6NKF7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM88BA6NKF7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM88BA6NKF7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM88BA6NKF7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.18■□□□□ 0.82
TMEM88BA6NKF7 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TMEM88BA6NKF7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM88BA6NKF7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC20.17■□□□□ 0.82
TMEM88BA6NKF7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC20.17■□□□□ 0.82
TMEM88BA6NKF7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.17■□□□□ 0.82
TMEM88BA6NKF7 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM88BA6NKF7 AC022210.1-201ENST00000449856 793 ntBASIC20.17■□□□□ 0.82
TMEM88BA6NKF7 GALT-202ENST00000450095 1280 ntTSL 2 BASIC20.17■□□□□ 0.82
TMEM88BA6NKF7 RN7SL752P-201ENST00000463779 287 ntBASIC20.17■□□□□ 0.82
TMEM88BA6NKF7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC20.17■□□□□ 0.82
TMEM88BA6NKF7 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM88BA6NKF7 AP000842.3-202ENST00000569238 1080 ntBASIC20.17■□□□□ 0.82
TMEM88BA6NKF7 AC132938.2-201ENST00000579188 680 ntBASIC20.17■□□□□ 0.82
TMEM88BA6NKF7 AL591163.1-201ENST00000641757 987 ntBASIC20.17■□□□□ 0.82
TMEM88BA6NKF7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.17■□□□□ 0.82
TMEM88BA6NKF7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM88BA6NKF7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM88BA6NKF7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM88BA6NKF7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TMEM88BA6NKF7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms