Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 PPP1R14BP2-201ENST00000426284 444 ntBASIC12.52□□□□□ -0.41
LINC01549A6NIU2 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 CA15P1-201ENST00000481698 905 ntBASIC12.52□□□□□ -0.41
LINC01549A6NIU2 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 NAT14-202ENST00000587400 416 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 AC011298.2-201ENST00000617989 482 ntBASIC12.52□□□□□ -0.41
LINC01549A6NIU2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 AL031985.4-201ENST00000642138 673 ntBASIC12.52□□□□□ -0.41
LINC01549A6NIU2 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 AL024508.2-201ENST00000607749 1894 ntBASIC12.51□□□□□ -0.41
LINC01549A6NIU2 AC126755.1-201ENST00000525846 6405 ntBASIC12.51□□□□□ -0.41
LINC01549A6NIU2 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 THEM4-205ENST00000489410 643 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01549A6NIU2 AL513523.2-202ENST00000427283 2040 ntBASIC12.5□□□□□ -0.41
LINC01549A6NIU2 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01549A6NIU2 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01549A6NIU2 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC01549A6NIU2 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC01549A6NIU2 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01549A6NIU2 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms