Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TVP23AA6NH52 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TVP23AA6NH52 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TVP23AA6NH52 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.72■□□□□ 0.11
TVP23AA6NH52 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TVP23AA6NH52 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TVP23AA6NH52 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TVP23AA6NH52 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.72■□□□□ 0.11
TVP23AA6NH52 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.72■□□□□ 0.11
TVP23AA6NH52 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TVP23AA6NH52 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TVP23AA6NH52 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TVP23AA6NH52 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
TVP23AA6NH52 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.71■□□□□ 0.11
TVP23AA6NH52 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TVP23AA6NH52 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
TVP23AA6NH52 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TVP23AA6NH52 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
TVP23AA6NH52 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TVP23AA6NH52 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TVP23AA6NH52 IGHGP-201ENST00000390555 1178 ntBASIC15.71■□□□□ 0.11
TVP23AA6NH52 AL359075.1-203ENST00000462729 1002 ntBASIC15.71■□□□□ 0.11
TVP23AA6NH52 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TVP23AA6NH52 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.71■□□□□ 0.11
TVP23AA6NH52 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.71■□□□□ 0.11
TVP23AA6NH52 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.71■□□□□ 0.11
TVP23AA6NH52 AC012306.2-201ENST00000609350 630 ntBASIC15.71■□□□□ 0.11
TVP23AA6NH52 AC073912.3-201ENST00000624414 853 ntBASIC15.71■□□□□ 0.11
TVP23AA6NH52 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TVP23AA6NH52 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TVP23AA6NH52 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.71■□□□□ 0.11
TVP23AA6NH52 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TVP23AA6NH52 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TVP23AA6NH52 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TVP23AA6NH52 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TVP23AA6NH52 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TVP23AA6NH52 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TVP23AA6NH52 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TVP23AA6NH52 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TVP23AA6NH52 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.71■□□□□ 0.11
TVP23AA6NH52 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TVP23AA6NH52 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
TVP23AA6NH52 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
TVP23AA6NH52 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TVP23AA6NH52 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TVP23AA6NH52 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
TVP23AA6NH52 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TVP23AA6NH52 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TVP23AA6NH52 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TVP23AA6NH52 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TVP23AA6NH52 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TVP23AA6NH52 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TVP23AA6NH52 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.7■□□□□ 0.1
TVP23AA6NH52 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TVP23AA6NH52 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TVP23AA6NH52 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TVP23AA6NH52 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TVP23AA6NH52 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TVP23AA6NH52 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.7■□□□□ 0.1
TVP23AA6NH52 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TVP23AA6NH52 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.7■□□□□ 0.1
TVP23AA6NH52 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.7■□□□□ 0.1
TVP23AA6NH52 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TVP23AA6NH52 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.7■□□□□ 0.1
TVP23AA6NH52 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
TVP23AA6NH52 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TVP23AA6NH52 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.7■□□□□ 0.1
TVP23AA6NH52 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.7■□□□□ 0.1
TVP23AA6NH52 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
TVP23AA6NH52 AC097493.4-201ENST00000641197 219 ntBASIC15.7■□□□□ 0.1
TVP23AA6NH52 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TVP23AA6NH52 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TVP23AA6NH52 AL353692.3-201ENST00000407031 1396 ntBASIC15.7■□□□□ 0.1
TVP23AA6NH52 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TVP23AA6NH52 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TVP23AA6NH52 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TVP23AA6NH52 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TVP23AA6NH52 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TVP23AA6NH52 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TVP23AA6NH52 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TVP23AA6NH52 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.69■□□□□ 0.1
TVP23AA6NH52 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TVP23AA6NH52 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TVP23AA6NH52 AC073508.3-201ENST00000619697 1419 ntBASIC15.69■□□□□ 0.1
TVP23AA6NH52 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TVP23AA6NH52 BX276092.7-203ENST00000637198 1536 ntBASIC15.69■□□□□ 0.1
TVP23AA6NH52 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TVP23AA6NH52 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TVP23AA6NH52 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TVP23AA6NH52 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TVP23AA6NH52 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TVP23AA6NH52 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TVP23AA6NH52 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TVP23AA6NH52 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TVP23AA6NH52 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.69■□□□□ 0.1
TVP23AA6NH52 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.69■□□□□ 0.1
TVP23AA6NH52 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.69■□□□□ 0.1
TVP23AA6NH52 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.69■□□□□ 0.1
TVP23AA6NH52 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TVP23AA6NH52 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms