Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LRIT2A6NDA9 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRIT2A6NDA9 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRIT2A6NDA9 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRIT2A6NDA9 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRIT2A6NDA9 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRIT2A6NDA9 AC132938.5-201ENST00000624980 1813 ntBASIC16.69■□□□□ 0.26
LRIT2A6NDA9 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRIT2A6NDA9 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
LRIT2A6NDA9 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRIT2A6NDA9 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRIT2A6NDA9 KRT18P31-201ENST00000506277 1292 ntBASIC16.69■□□□□ 0.26
LRIT2A6NDA9 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.69■□□□□ 0.26
LRIT2A6NDA9 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.69■□□□□ 0.26
LRIT2A6NDA9 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.69■□□□□ 0.26
LRIT2A6NDA9 CLEC4GP1-201ENST00000596555 870 ntBASIC16.69■□□□□ 0.26
LRIT2A6NDA9 AP000867.4-201ENST00000641616 219 ntBASIC16.69■□□□□ 0.26
LRIT2A6NDA9 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.69■□□□□ 0.26
LRIT2A6NDA9 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRIT2A6NDA9 AC139713.2-201ENST00000641328 2723 ntBASIC16.69■□□□□ 0.26
LRIT2A6NDA9 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRIT2A6NDA9 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRIT2A6NDA9 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.69■□□□□ 0.26
LRIT2A6NDA9 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRIT2A6NDA9 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.69■□□□□ 0.26
LRIT2A6NDA9 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
LRIT2A6NDA9 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRIT2A6NDA9 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.69■□□□□ 0.26
LRIT2A6NDA9 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LRIT2A6NDA9 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRIT2A6NDA9 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.68■□□□□ 0.26
LRIT2A6NDA9 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.68■□□□□ 0.26
LRIT2A6NDA9 CROCCP2-202ENST00000412962 2773 ntBASIC16.68■□□□□ 0.26
LRIT2A6NDA9 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRIT2A6NDA9 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LRIT2A6NDA9 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRIT2A6NDA9 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.68■□□□□ 0.26
LRIT2A6NDA9 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRIT2A6NDA9 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
LRIT2A6NDA9 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRIT2A6NDA9 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.68■□□□□ 0.26
LRIT2A6NDA9 ABCD1P5-201ENST00000445663 754 ntBASIC16.68■□□□□ 0.26
LRIT2A6NDA9 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LRIT2A6NDA9 AC132008.2-207ENST00000454517 770 ntBASIC16.68■□□□□ 0.26
LRIT2A6NDA9 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.68■□□□□ 0.26
LRIT2A6NDA9 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.68■□□□□ 0.26
LRIT2A6NDA9 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRIT2A6NDA9 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
LRIT2A6NDA9 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRIT2A6NDA9 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRIT2A6NDA9 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRIT2A6NDA9 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
LRIT2A6NDA9 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRIT2A6NDA9 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRIT2A6NDA9 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRIT2A6NDA9 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.68■□□□□ 0.26
LRIT2A6NDA9 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.67■□□□□ 0.26
LRIT2A6NDA9 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.67■□□□□ 0.26
LRIT2A6NDA9 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRIT2A6NDA9 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
LRIT2A6NDA9 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRIT2A6NDA9 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
LRIT2A6NDA9 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRIT2A6NDA9 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.67■□□□□ 0.26
LRIT2A6NDA9 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRIT2A6NDA9 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRIT2A6NDA9 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.67■□□□□ 0.26
LRIT2A6NDA9 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRIT2A6NDA9 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.67■□□□□ 0.26
LRIT2A6NDA9 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.67■□□□□ 0.26
LRIT2A6NDA9 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.67■□□□□ 0.26
LRIT2A6NDA9 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.67■□□□□ 0.26
LRIT2A6NDA9 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.67■□□□□ 0.26
LRIT2A6NDA9 AC091304.2-201ENST00000564639 760 ntBASIC16.67■□□□□ 0.26
LRIT2A6NDA9 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.67■□□□□ 0.26
LRIT2A6NDA9 AC073592.5-201ENST00000624854 528 ntBASIC16.67■□□□□ 0.26
LRIT2A6NDA9 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.67■□□□□ 0.26
LRIT2A6NDA9 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
LRIT2A6NDA9 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.67■□□□□ 0.26
LRIT2A6NDA9 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.67■□□□□ 0.26
LRIT2A6NDA9 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
LRIT2A6NDA9 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRIT2A6NDA9 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRIT2A6NDA9 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRIT2A6NDA9 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRIT2A6NDA9 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRIT2A6NDA9 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
LRIT2A6NDA9 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRIT2A6NDA9 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.66■□□□□ 0.26
LRIT2A6NDA9 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.66■□□□□ 0.26
LRIT2A6NDA9 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.66■□□□□ 0.26
LRIT2A6NDA9 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRIT2A6NDA9 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRIT2A6NDA9 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRIT2A6NDA9 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRIT2A6NDA9 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LRIT2A6NDA9 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.66■□□□□ 0.26
LRIT2A6NDA9 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.66■□□□□ 0.26
LRIT2A6NDA9 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRIT2A6NDA9 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms