Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
HFM1A2PYH4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
HFM1A2PYH4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
HFM1A2PYH4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
HFM1A2PYH4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
HFM1A2PYH4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
HFM1A2PYH4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC25.77■■□□□ 1.72
HFM1A2PYH4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
HFM1A2PYH4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC25.77■■□□□ 1.72
HFM1A2PYH4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
HFM1A2PYH4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC25.77■■□□□ 1.72
HFM1A2PYH4 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
HFM1A2PYH4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
HFM1A2PYH4 AC007967.2-201ENST00000432613 625 ntBASIC25.77■■□□□ 1.72
HFM1A2PYH4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC25.77■■□□□ 1.72
HFM1A2PYH4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC25.77■■□□□ 1.72
HFM1A2PYH4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
HFM1A2PYH4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
HFM1A2PYH4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
HFM1A2PYH4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC25.77■■□□□ 1.72
HFM1A2PYH4 HNRNPRP1-201ENST00000453465 1695 ntBASIC25.76■■□□□ 1.72
HFM1A2PYH4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
HFM1A2PYH4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
HFM1A2PYH4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
HFM1A2PYH4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
HFM1A2PYH4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
HFM1A2PYH4 PRSS29P-201ENST00000440800 595 ntBASIC25.76■■□□□ 1.71
HFM1A2PYH4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC25.76■■□□□ 1.71
HFM1A2PYH4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
HFM1A2PYH4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC25.76■■□□□ 1.71
HFM1A2PYH4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC25.76■■□□□ 1.71
HFM1A2PYH4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
HFM1A2PYH4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC25.76■■□□□ 1.71
HFM1A2PYH4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC25.76■■□□□ 1.71
HFM1A2PYH4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
HFM1A2PYH4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
HFM1A2PYH4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC25.76■■□□□ 1.71
HFM1A2PYH4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC25.76■■□□□ 1.71
HFM1A2PYH4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC25.75■■□□□ 1.71
HFM1A2PYH4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
HFM1A2PYH4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
HFM1A2PYH4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC25.75■■□□□ 1.71
HFM1A2PYH4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC25.75■■□□□ 1.71
HFM1A2PYH4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
HFM1A2PYH4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
HFM1A2PYH4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC25.75■■□□□ 1.71
HFM1A2PYH4 AC087163.2-201ENST00000457299 853 ntBASIC25.75■■□□□ 1.71
HFM1A2PYH4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
HFM1A2PYH4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC25.75■■□□□ 1.71
HFM1A2PYH4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
HFM1A2PYH4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC25.75■■□□□ 1.71
HFM1A2PYH4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC25.75■■□□□ 1.71
HFM1A2PYH4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
HFM1A2PYH4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
HFM1A2PYH4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
HFM1A2PYH4 EGFEM1P-202ENST00000431685 1563 ntBASIC25.75■■□□□ 1.71
HFM1A2PYH4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
HFM1A2PYH4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
HFM1A2PYH4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
HFM1A2PYH4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC25.75■■□□□ 1.71
HFM1A2PYH4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
HFM1A2PYH4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
HFM1A2PYH4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
HFM1A2PYH4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
HFM1A2PYH4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
HFM1A2PYH4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
HFM1A2PYH4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
HFM1A2PYH4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
HFM1A2PYH4 HNRNPA1P28-201ENST00000424481 961 ntBASIC25.74■■□□□ 1.71
HFM1A2PYH4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC25.74■■□□□ 1.71
HFM1A2PYH4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC25.74■■□□□ 1.71
HFM1A2PYH4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC25.74■■□□□ 1.71
HFM1A2PYH4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC25.74■■□□□ 1.71
HFM1A2PYH4 LINC00896-202ENST00000609602 2128 ntBASIC25.74■■□□□ 1.71
HFM1A2PYH4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
HFM1A2PYH4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
HFM1A2PYH4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
HFM1A2PYH4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC25.73■■□□□ 1.71
HFM1A2PYH4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
HFM1A2PYH4 MRPL20P1-201ENST00000400819 433 ntBASIC25.73■■□□□ 1.71
HFM1A2PYH4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC25.73■■□□□ 1.71
HFM1A2PYH4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC25.73■■□□□ 1.71
HFM1A2PYH4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC25.73■■□□□ 1.71
HFM1A2PYH4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC25.73■■□□□ 1.71
HFM1A2PYH4 MIR4751-201ENST00000578027 74 ntBASIC25.73■■□□□ 1.71
HFM1A2PYH4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC25.73■■□□□ 1.71
HFM1A2PYH4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC25.73■■□□□ 1.71
HFM1A2PYH4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC25.73■■□□□ 1.71
HFM1A2PYH4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
HFM1A2PYH4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC25.73■■□□□ 1.71
HFM1A2PYH4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC25.73■■□□□ 1.71
HFM1A2PYH4 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
HFM1A2PYH4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
HFM1A2PYH4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
HFM1A2PYH4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
HFM1A2PYH4 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC25.73■■□□□ 1.71
HFM1A2PYH4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC25.73■■□□□ 1.71
HFM1A2PYH4 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC25.73■■□□□ 1.71
HFM1A2PYH4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC25.73■■□□□ 1.71
HFM1A2PYH4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms