Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV3S1A0A5B6 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV3S1A0A5B6 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
TCRBV3S1A0A5B6 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TCRBV3S1A0A5B6 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV3S1A0A5B6 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.45■□□□□ 0.22
TCRBV3S1A0A5B6 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.45■□□□□ 0.22
TCRBV3S1A0A5B6 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV3S1A0A5B6 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV3S1A0A5B6 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV3S1A0A5B6 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV3S1A0A5B6 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 AL662844.4-201ENST00000606367 2838 ntBASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TCRBV3S1A0A5B6 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TCRBV3S1A0A5B6 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.43■□□□□ 0.22
TCRBV3S1A0A5B6 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TCRBV3S1A0A5B6 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TCRBV3S1A0A5B6 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TCRBV3S1A0A5B6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.43■□□□□ 0.22
TCRBV3S1A0A5B6 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TCRBV3S1A0A5B6 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.43■□□□□ 0.22
TCRBV3S1A0A5B6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.43■□□□□ 0.22
TCRBV3S1A0A5B6 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TCRBV3S1A0A5B6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TCRBV3S1A0A5B6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.43■□□□□ 0.22
TCRBV3S1A0A5B6 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.43■□□□□ 0.22
TCRBV3S1A0A5B6 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TCRBV3S1A0A5B6 AL355802.2-201ENST00000402069 882 ntBASIC16.43■□□□□ 0.22
TCRBV3S1A0A5B6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.43■□□□□ 0.22
TCRBV3S1A0A5B6 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TCRBV3S1A0A5B6 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.43■□□□□ 0.22
TCRBV3S1A0A5B6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TCRBV3S1A0A5B6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TCRBV3S1A0A5B6 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.43■□□□□ 0.22
TCRBV3S1A0A5B6 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TCRBV3S1A0A5B6 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TCRBV3S1A0A5B6 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TCRBV3S1A0A5B6 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.43■□□□□ 0.22
TCRBV3S1A0A5B6 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TCRBV3S1A0A5B6 AC092338.2-201ENST00000568827 1415 ntBASIC16.43■□□□□ 0.22
TCRBV3S1A0A5B6 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TCRBV3S1A0A5B6 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TCRBV3S1A0A5B6 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TCRBV3S1A0A5B6 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.43■□□□□ 0.22
TCRBV3S1A0A5B6 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 PVRIG2P-201ENST00000435460 978 ntBASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.42■□□□□ 0.22
TCRBV3S1A0A5B6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms