Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.97■□□□□ 0.31
RNF103-CHMP3A0A140T963 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RNF103-CHMP3A0A140T963 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF103-CHMP3A0A140T963 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF103-CHMP3A0A140T963 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF103-CHMP3A0A140T963 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF103-CHMP3A0A140T963 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.97■□□□□ 0.31
RNF103-CHMP3A0A140T963 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF103-CHMP3A0A140T963 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
RNF103-CHMP3A0A140T963 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF103-CHMP3A0A140T963 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF103-CHMP3A0A140T963 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
RNF103-CHMP3A0A140T963 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
RNF103-CHMP3A0A140T963 AC046158.3-201ENST00000624947 2558 ntBASIC16.96■□□□□ 0.31
RNF103-CHMP3A0A140T963 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF103-CHMP3A0A140T963 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF103-CHMP3A0A140T963 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF103-CHMP3A0A140T963 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
RNF103-CHMP3A0A140T963 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
RNF103-CHMP3A0A140T963 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF103-CHMP3A0A140T963 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF103-CHMP3A0A140T963 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF103-CHMP3A0A140T963 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.96■□□□□ 0.31
RNF103-CHMP3A0A140T963 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF103-CHMP3A0A140T963 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.96■□□□□ 0.31
RNF103-CHMP3A0A140T963 PVRIG2P-201ENST00000435460 978 ntBASIC16.96■□□□□ 0.31
RNF103-CHMP3A0A140T963 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.96■□□□□ 0.31
RNF103-CHMP3A0A140T963 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.96■□□□□ 0.31
RNF103-CHMP3A0A140T963 DUTP2-201ENST00000519164 463 ntBASIC16.96■□□□□ 0.31
RNF103-CHMP3A0A140T963 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
RNF103-CHMP3A0A140T963 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.96■□□□□ 0.31
RNF103-CHMP3A0A140T963 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RNF103-CHMP3A0A140T963 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.96■□□□□ 0.31
RNF103-CHMP3A0A140T963 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
RNF103-CHMP3A0A140T963 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.96■□□□□ 0.31
RNF103-CHMP3A0A140T963 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.96■□□□□ 0.31
RNF103-CHMP3A0A140T963 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RNF103-CHMP3A0A140T963 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RNF103-CHMP3A0A140T963 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
RNF103-CHMP3A0A140T963 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF103-CHMP3A0A140T963 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF103-CHMP3A0A140T963 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RNF103-CHMP3A0A140T963 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.3
RNF103-CHMP3A0A140T963 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RNF103-CHMP3A0A140T963 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RNF103-CHMP3A0A140T963 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RNF103-CHMP3A0A140T963 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RNF103-CHMP3A0A140T963 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.96■□□□□ 0.3
RNF103-CHMP3A0A140T963 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RNF103-CHMP3A0A140T963 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
RNF103-CHMP3A0A140T963 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.96■□□□□ 0.3
RNF103-CHMP3A0A140T963 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RNF103-CHMP3A0A140T963 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF103-CHMP3A0A140T963 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF103-CHMP3A0A140T963 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF103-CHMP3A0A140T963 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.95■□□□□ 0.3
RNF103-CHMP3A0A140T963 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF103-CHMP3A0A140T963 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
RNF103-CHMP3A0A140T963 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RNF103-CHMP3A0A140T963 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
RNF103-CHMP3A0A140T963 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF103-CHMP3A0A140T963 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF103-CHMP3A0A140T963 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.95■□□□□ 0.3
RNF103-CHMP3A0A140T963 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.95■□□□□ 0.3
RNF103-CHMP3A0A140T963 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
RNF103-CHMP3A0A140T963 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF103-CHMP3A0A140T963 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RNF103-CHMP3A0A140T963 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF103-CHMP3A0A140T963 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF103-CHMP3A0A140T963 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF103-CHMP3A0A140T963 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF103-CHMP3A0A140T963 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF103-CHMP3A0A140T963 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.95■□□□□ 0.3
RNF103-CHMP3A0A140T963 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF103-CHMP3A0A140T963 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.95■□□□□ 0.3
RNF103-CHMP3A0A140T963 AC141257.4-201ENST00000634557 245 ntBASIC16.95■□□□□ 0.3
RNF103-CHMP3A0A140T963 AC136944.6-201ENST00000634818 245 ntBASIC16.95■□□□□ 0.3
RNF103-CHMP3A0A140T963 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RNF103-CHMP3A0A140T963 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF103-CHMP3A0A140T963 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF103-CHMP3A0A140T963 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF103-CHMP3A0A140T963 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF103-CHMP3A0A140T963 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF103-CHMP3A0A140T963 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 CROCCP2-202ENST00000412962 2773 ntBASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms