Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 AL354751.1-201ENST00000412768 1863 ntBASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 MRPL3P1-201ENST00000400109 1033 ntBASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 KRT18P67-201ENST00000432816 1264 ntBASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 NKTR-203ENST00000442970 646 ntTSL 2 BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 AC079776.4-201ENST00000511039 504 ntBASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 SLC25A6P4-201ENST00000586535 553 ntBASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 AL356309.3-201ENST00000624132 1934 ntBASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 PC-208ENST00000529047 1607 ntTSL 3 BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 AL390961.4-201ENST00000623958 2535 ntBASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 PXK-206ENST00000463280 2825 ntTSL 2 BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 AP000867.4-201ENST00000641616 219 ntBASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC12.69□□□□□ -0.38
IGHV4-28A0A0C4DH34 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms