Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 TSEN15P1-201ENST00000423257 515 ntBASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 OR7E47P-204ENST00000575924 449 ntBASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 AC011467.4-201ENST00000594891 528 ntBASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 AC092364.2-202ENST00000597012 1073 ntBASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC187A0A096LP49 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC187A0A096LP49 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC187A0A096LP49 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC187A0A096LP49 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CCDC187A0A096LP49 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC187A0A096LP49 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC187A0A096LP49 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.56■□□□□ 0.24
CCDC187A0A096LP49 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC187A0A096LP49 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC187A0A096LP49 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC187A0A096LP49 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.56■□□□□ 0.24
CCDC187A0A096LP49 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC187A0A096LP49 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC187A0A096LP49 MIR770-201ENST00000390219 98 ntBASIC16.56■□□□□ 0.24
CCDC187A0A096LP49 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC187A0A096LP49 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC187A0A096LP49 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC187A0A096LP49 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.56■□□□□ 0.24
CCDC187A0A096LP49 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC187A0A096LP49 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.56■□□□□ 0.24
CCDC187A0A096LP49 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC187A0A096LP49 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC187A0A096LP49 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.56■□□□□ 0.24
CCDC187A0A096LP49 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC187A0A096LP49 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC187A0A096LP49 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC187A0A096LP49 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC187A0A096LP49 AC009949.1-201ENST00000623048 1830 ntBASIC16.56■□□□□ 0.24
CCDC187A0A096LP49 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC187A0A096LP49 PI4KAP1-204ENST00000612579 1703 ntBASIC16.56■□□□□ 0.24
CCDC187A0A096LP49 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC187A0A096LP49 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC187A0A096LP49 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.56■□□□□ 0.24
CCDC187A0A096LP49 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 FAM8A3P-201ENST00000427218 844 ntBASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 AC004835.2-201ENST00000603762 682 ntBASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 AC091812.2-201ENST00000619081 385 ntBASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.55■□□□□ 0.24
CCDC187A0A096LP49 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms