Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 LINC01311-201ENST00000565162 1445 ntBASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 AC211429.1-201ENST00000415277 523 ntBASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 RNF126P1-202ENST00000569893 925 ntBASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 HYMAI.1-201ENST00000620949 238 ntBASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 Z83836.1-201ENST00000624605 1642 ntBASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TRAV27A0A087WT01 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TRAV27A0A087WT01 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV27A0A087WT01 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAV27A0A087WT01 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV27A0A087WT01 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV27A0A087WT01 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV27A0A087WT01 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV27A0A087WT01 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV27A0A087WT01 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAV27A0A087WT01 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV27A0A087WT01 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
TRAV27A0A087WT01 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV27A0A087WT01 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV27A0A087WT01 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV27A0A087WT01 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV27A0A087WT01 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV27A0A087WT01 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV27A0A087WT01 AC005104.2-201ENST00000427818 678 ntBASIC15.93■□□□□ 0.14
TRAV27A0A087WT01 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.93■□□□□ 0.14
TRAV27A0A087WT01 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV27A0A087WT01 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV27A0A087WT01 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.93■□□□□ 0.14
TRAV27A0A087WT01 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAV27A0A087WT01 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.93■□□□□ 0.14
TRAV27A0A087WT01 AL390719.2-201ENST00000606993 987 ntBASIC15.93■□□□□ 0.14
TRAV27A0A087WT01 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TRAV27A0A087WT01 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV27A0A087WT01 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV27A0A087WT01 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV27A0A087WT01 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV27A0A087WT01 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV27A0A087WT01 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV27A0A087WT01 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV27A0A087WT01 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TRAV27A0A087WT01 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV27A0A087WT01 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV27A0A087WT01 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV27A0A087WT01 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV27A0A087WT01 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV27A0A087WT01 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV27A0A087WT01 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV27A0A087WT01 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV27A0A087WT01 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV27A0A087WT01 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
TRAV27A0A087WT01 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV27A0A087WT01 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV27A0A087WT01 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV27A0A087WT01 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV27A0A087WT01 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV27A0A087WT01 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV27A0A087WT01 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV27A0A087WT01 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.92■□□□□ 0.14
TRAV27A0A087WT01 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV27A0A087WT01 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV27A0A087WT01 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV27A0A087WT01 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV27A0A087WT01 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV27A0A087WT01 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV27A0A087WT01 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms