Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV18A0A075B6X5 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV18A0A075B6X5 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV18A0A075B6X5 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV18A0A075B6X5 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV18A0A075B6X5 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV18A0A075B6X5 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV18A0A075B6X5 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV18A0A075B6X5 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV18A0A075B6X5 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV18A0A075B6X5 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV18A0A075B6X5 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV18A0A075B6X5 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV18A0A075B6X5 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 NUDT16P1-203ENST00000513809 620 ntBASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV18A0A075B6X5 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 AL603756.1-201ENST00000606511 2163 ntBASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV18A0A075B6X5 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms