Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 AC010525.1-201ENST00000585559 441 ntBASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 AC006538.1-201ENST00000567905 1585 ntBASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 PHGDH-209ENST00000641074 1780 ntBASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 AC007191.1-201ENST00000623179 2995 ntBASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 AC007322.3-201ENST00000426526 701 ntBASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 AC097381.1-201ENST00000429019 1296 ntBASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 MTX2-204ENST00000443241 799 ntTSL 3 BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 AP005435.1-201ENST00000529293 1178 ntBASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 CR559946.2-201ENST00000623684 991 ntBASIC9.06□□□□□ -0.96
LINC01558Q9Y6Z2 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms