Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.54■□□□□ 0.4
USH1CQ9Y6N9 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.54■□□□□ 0.4
USH1CQ9Y6N9 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.54■□□□□ 0.4
USH1CQ9Y6N9 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.54■□□□□ 0.4
USH1CQ9Y6N9 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
USH1CQ9Y6N9 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.54■□□□□ 0.4
USH1CQ9Y6N9 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
USH1CQ9Y6N9 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USH1CQ9Y6N9 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USH1CQ9Y6N9 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USH1CQ9Y6N9 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USH1CQ9Y6N9 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
USH1CQ9Y6N9 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
USH1CQ9Y6N9 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
USH1CQ9Y6N9 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.53■□□□□ 0.4
USH1CQ9Y6N9 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USH1CQ9Y6N9 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
USH1CQ9Y6N9 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
USH1CQ9Y6N9 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USH1CQ9Y6N9 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.53■□□□□ 0.4
USH1CQ9Y6N9 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.53■□□□□ 0.4
USH1CQ9Y6N9 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
USH1CQ9Y6N9 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.53■□□□□ 0.4
USH1CQ9Y6N9 AL356309.3-201ENST00000624132 1934 ntBASIC17.53■□□□□ 0.4
USH1CQ9Y6N9 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USH1CQ9Y6N9 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USH1CQ9Y6N9 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USH1CQ9Y6N9 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
USH1CQ9Y6N9 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.53■□□□□ 0.4
USH1CQ9Y6N9 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.53■□□□□ 0.4
USH1CQ9Y6N9 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USH1CQ9Y6N9 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.53■□□□□ 0.4
USH1CQ9Y6N9 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USH1CQ9Y6N9 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USH1CQ9Y6N9 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.53■□□□□ 0.4
USH1CQ9Y6N9 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.53■□□□□ 0.4
USH1CQ9Y6N9 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
USH1CQ9Y6N9 AC006058.3-201ENST00000606217 1069 ntBASIC17.53■□□□□ 0.4
USH1CQ9Y6N9 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USH1CQ9Y6N9 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USH1CQ9Y6N9 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USH1CQ9Y6N9 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
USH1CQ9Y6N9 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.53■□□□□ 0.4
USH1CQ9Y6N9 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USH1CQ9Y6N9 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USH1CQ9Y6N9 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.53■□□□□ 0.4
USH1CQ9Y6N9 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
USH1CQ9Y6N9 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.52■□□□□ 0.4
USH1CQ9Y6N9 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
USH1CQ9Y6N9 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
USH1CQ9Y6N9 AC022898.2-201ENST00000616822 1312 ntBASIC17.52■□□□□ 0.4
USH1CQ9Y6N9 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
USH1CQ9Y6N9 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
USH1CQ9Y6N9 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
USH1CQ9Y6N9 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
USH1CQ9Y6N9 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.52■□□□□ 0.4
USH1CQ9Y6N9 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.52■□□□□ 0.4
USH1CQ9Y6N9 AC097488.1-201ENST00000507834 756 ntBASIC17.52■□□□□ 0.4
USH1CQ9Y6N9 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.52■□□□□ 0.4
USH1CQ9Y6N9 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.52■□□□□ 0.4
USH1CQ9Y6N9 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
USH1CQ9Y6N9 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
USH1CQ9Y6N9 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
USH1CQ9Y6N9 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.52■□□□□ 0.4
USH1CQ9Y6N9 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
USH1CQ9Y6N9 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
USH1CQ9Y6N9 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.52■□□□□ 0.4
USH1CQ9Y6N9 AC016396.2-201ENST00000562575 1417 ntBASIC17.52■□□□□ 0.4
USH1CQ9Y6N9 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.52■□□□□ 0.4
USH1CQ9Y6N9 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
USH1CQ9Y6N9 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
USH1CQ9Y6N9 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
USH1CQ9Y6N9 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.52■□□□□ 0.4
USH1CQ9Y6N9 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
USH1CQ9Y6N9 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
USH1CQ9Y6N9 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
USH1CQ9Y6N9 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
USH1CQ9Y6N9 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
USH1CQ9Y6N9 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.52■□□□□ 0.39
USH1CQ9Y6N9 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
USH1CQ9Y6N9 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
USH1CQ9Y6N9 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
USH1CQ9Y6N9 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
USH1CQ9Y6N9 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
USH1CQ9Y6N9 AC026691.1-201ENST00000602502 2017 ntBASIC17.52■□□□□ 0.39
USH1CQ9Y6N9 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.52■□□□□ 0.39
USH1CQ9Y6N9 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
USH1CQ9Y6N9 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
USH1CQ9Y6N9 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
USH1CQ9Y6N9 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
USH1CQ9Y6N9 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
USH1CQ9Y6N9 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.51■□□□□ 0.39
USH1CQ9Y6N9 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
USH1CQ9Y6N9 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USH1CQ9Y6N9 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
USH1CQ9Y6N9 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.51■□□□□ 0.39
USH1CQ9Y6N9 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USH1CQ9Y6N9 REXO1L11P-201ENST00000620964 1927 ntBASIC17.51■□□□□ 0.39
USH1CQ9Y6N9 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.51■□□□□ 0.39
USH1CQ9Y6N9 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms