Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 SIRPAP1-201ENST00000448467 1770 ntBASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 AC004832.2-201ENST00000426397 482 ntBASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 DDX43P3-201ENST00000441064 443 ntBASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 MIR3687-2-201ENST00000577708 61 ntBASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 MIR3687-1-201ENST00000614492 61 ntBASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 NCF1C-201ENST00000438382 1427 ntBASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 AL133373.2-201ENST00000623187 2828 ntBASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 BX276092.7-203ENST00000637198 1536 ntBASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 BICD1-207ENST00000551848 1962 ntBASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 YBX2P1-201ENST00000394192 760 ntBASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 RPSAP43-201ENST00000402237 625 ntBASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 KLF4P1-201ENST00000412782 1185 ntBASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 AC092183.1-201ENST00000469884 875 ntBASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 AC108751.1-201ENST00000490852 363 ntBASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 LTB4R2-202ENST00000528054 3092 ntBASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 AC002347.1-201ENST00000569543 541 ntBASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 AL139424.1-201ENST00000607572 797 ntBASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSNK1G3Q9Y6M4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 AC093677.2-201ENST00000600169 1863 ntBASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 GPX1P2-201ENST00000429271 606 ntBASIC17.16■□□□□ 0.34
CSNK1G3Q9Y6M4 AC007967.2-201ENST00000432613 625 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms