Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GPC6Q9Y625 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.69■□□□□ 0.26
GPC6Q9Y625 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
GPC6Q9Y625 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GPC6Q9Y625 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GPC6Q9Y625 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
GPC6Q9Y625 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
GPC6Q9Y625 PP12613-201ENST00000424958 2230 ntBASIC16.69■□□□□ 0.26
GPC6Q9Y625 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GPC6Q9Y625 PCDH8P1-201ENST00000428983 2773 ntBASIC16.69■□□□□ 0.26
GPC6Q9Y625 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
GPC6Q9Y625 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.69■□□□□ 0.26
GPC6Q9Y625 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
GPC6Q9Y625 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GPC6Q9Y625 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GPC6Q9Y625 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
GPC6Q9Y625 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GPC6Q9Y625 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GPC6Q9Y625 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.69■□□□□ 0.26
GPC6Q9Y625 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.69■□□□□ 0.26
GPC6Q9Y625 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.69■□□□□ 0.26
GPC6Q9Y625 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.69■□□□□ 0.26
GPC6Q9Y625 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.69■□□□□ 0.26
GPC6Q9Y625 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.69■□□□□ 0.26
GPC6Q9Y625 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
GPC6Q9Y625 AL157888.1-201ENST00000631930 593 ntBASIC16.69■□□□□ 0.26
GPC6Q9Y625 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GPC6Q9Y625 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GPC6Q9Y625 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.69■□□□□ 0.26
GPC6Q9Y625 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
GPC6Q9Y625 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GPC6Q9Y625 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GPC6Q9Y625 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GPC6Q9Y625 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.69■□□□□ 0.26
GPC6Q9Y625 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GPC6Q9Y625 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
GPC6Q9Y625 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GPC6Q9Y625 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.69■□□□□ 0.26
GPC6Q9Y625 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GPC6Q9Y625 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
GPC6Q9Y625 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.69■□□□□ 0.26
GPC6Q9Y625 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.69■□□□□ 0.26
GPC6Q9Y625 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
GPC6Q9Y625 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GPC6Q9Y625 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GPC6Q9Y625 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
GPC6Q9Y625 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
GPC6Q9Y625 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GPC6Q9Y625 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
GPC6Q9Y625 AL355312.1-201ENST00000407115 2176 ntBASIC16.68■□□□□ 0.26
GPC6Q9Y625 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GPC6Q9Y625 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GPC6Q9Y625 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
GPC6Q9Y625 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
GPC6Q9Y625 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GPC6Q9Y625 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
GPC6Q9Y625 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.68■□□□□ 0.26
GPC6Q9Y625 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.68■□□□□ 0.26
GPC6Q9Y625 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
GPC6Q9Y625 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GPC6Q9Y625 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GPC6Q9Y625 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
GPC6Q9Y625 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GPC6Q9Y625 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
GPC6Q9Y625 STARP1-201ENST00000397973 869 ntBASIC16.68■□□□□ 0.26
GPC6Q9Y625 FAM210CP-201ENST00000445714 574 ntBASIC16.68■□□□□ 0.26
GPC6Q9Y625 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.68■□□□□ 0.26
GPC6Q9Y625 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.68■□□□□ 0.26
GPC6Q9Y625 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
GPC6Q9Y625 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GPC6Q9Y625 KRT18P21-201ENST00000515767 1272 ntBASIC16.68■□□□□ 0.26
GPC6Q9Y625 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GPC6Q9Y625 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.68■□□□□ 0.26
GPC6Q9Y625 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GPC6Q9Y625 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
GPC6Q9Y625 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.68■□□□□ 0.26
GPC6Q9Y625 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GPC6Q9Y625 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GPC6Q9Y625 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
GPC6Q9Y625 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GPC6Q9Y625 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.68■□□□□ 0.26
GPC6Q9Y625 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.68■□□□□ 0.26
GPC6Q9Y625 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
GPC6Q9Y625 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GPC6Q9Y625 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC6Q9Y625 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC6Q9Y625 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.67■□□□□ 0.26
GPC6Q9Y625 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC6Q9Y625 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GPC6Q9Y625 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC6Q9Y625 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
GPC6Q9Y625 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC6Q9Y625 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC6Q9Y625 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
GPC6Q9Y625 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC6Q9Y625 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC6Q9Y625 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC6Q9Y625 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.67■□□□□ 0.26
GPC6Q9Y625 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.67■□□□□ 0.26
GPC6Q9Y625 AC104076.2-201ENST00000448912 469 ntBASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms