Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 SERPINH1P1-201ENST00000419794 1249 ntBASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 APTR-203ENST00000430801 583 ntTSL 5 BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 AL121832.2-201ENST00000610979 668 ntBASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 HLA-A-209ENST00000638375 975 ntBASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 SP100-208ENST00000427101 1922 ntTSL 2 BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC12.66□□□□□ -0.38
CHTOPQ9Y3Y2 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 TREX2-204ENST00000370212 861 ntTSL 5 BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 AC137761.2-201ENST00000561729 223 ntBASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 AC145350.3-201ENST00000569033 163 ntBASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 RALB-208ENST00000631312 311 ntTSL 5 BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CHTOPQ9Y3Y2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms