Protein–RNA interactions for Protein: Q9Y2Y8

PRG3, Proteoglycan 3, humanhuman

Predicted RBP Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG3Q9Y2Y8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRG3Q9Y2Y8 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRG3Q9Y2Y8 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.75■□□□□ 0.59
PRG3Q9Y2Y8 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRG3Q9Y2Y8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.75■□□□□ 0.59
PRG3Q9Y2Y8 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRG3Q9Y2Y8 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRG3Q9Y2Y8 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PRG3Q9Y2Y8 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.75■□□□□ 0.59
PRG3Q9Y2Y8 RPS8P6-201ENST00000426177 609 ntBASIC18.75■□□□□ 0.59
PRG3Q9Y2Y8 AC004832.2-201ENST00000426397 482 ntBASIC18.75■□□□□ 0.59
PRG3Q9Y2Y8 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.75■□□□□ 0.59
PRG3Q9Y2Y8 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.75■□□□□ 0.59
PRG3Q9Y2Y8 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.75■□□□□ 0.59
PRG3Q9Y2Y8 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.75■□□□□ 0.59
PRG3Q9Y2Y8 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.75■□□□□ 0.59
PRG3Q9Y2Y8 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.75■□□□□ 0.59
PRG3Q9Y2Y8 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.75■□□□□ 0.59
PRG3Q9Y2Y8 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PRG3Q9Y2Y8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.75■□□□□ 0.59
PRG3Q9Y2Y8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PRG3Q9Y2Y8 AC009336.1-201ENST00000608941 1553 ntBASIC18.75■□□□□ 0.59
PRG3Q9Y2Y8 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRG3Q9Y2Y8 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRG3Q9Y2Y8 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRG3Q9Y2Y8 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.74■□□□□ 0.59
PRG3Q9Y2Y8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.74■□□□□ 0.59
PRG3Q9Y2Y8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.74■□□□□ 0.59
PRG3Q9Y2Y8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.74■□□□□ 0.59
PRG3Q9Y2Y8 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.74■□□□□ 0.59
PRG3Q9Y2Y8 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRG3Q9Y2Y8 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRG3Q9Y2Y8 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRG3Q9Y2Y8 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.74■□□□□ 0.59
PRG3Q9Y2Y8 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.74■□□□□ 0.59
PRG3Q9Y2Y8 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRG3Q9Y2Y8 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PRG3Q9Y2Y8 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.74■□□□□ 0.59
PRG3Q9Y2Y8 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PRG3Q9Y2Y8 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.74■□□□□ 0.59
PRG3Q9Y2Y8 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.74■□□□□ 0.59
PRG3Q9Y2Y8 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.74■□□□□ 0.59
PRG3Q9Y2Y8 CRYGEP-201ENST00000412192 528 ntBASIC18.74■□□□□ 0.59
PRG3Q9Y2Y8 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.74■□□□□ 0.59
PRG3Q9Y2Y8 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.74■□□□□ 0.59
PRG3Q9Y2Y8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.74■□□□□ 0.59
PRG3Q9Y2Y8 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PRG3Q9Y2Y8 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.74■□□□□ 0.59
PRG3Q9Y2Y8 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.74■□□□□ 0.59
PRG3Q9Y2Y8 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRG3Q9Y2Y8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRG3Q9Y2Y8 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRG3Q9Y2Y8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PRG3Q9Y2Y8 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRG3Q9Y2Y8 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRG3Q9Y2Y8 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.73■□□□□ 0.59
PRG3Q9Y2Y8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRG3Q9Y2Y8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRG3Q9Y2Y8 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.73■□□□□ 0.59
PRG3Q9Y2Y8 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRG3Q9Y2Y8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRG3Q9Y2Y8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRG3Q9Y2Y8 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.73■□□□□ 0.59
PRG3Q9Y2Y8 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PRG3Q9Y2Y8 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRG3Q9Y2Y8 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.73■□□□□ 0.59
PRG3Q9Y2Y8 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRG3Q9Y2Y8 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.73■□□□□ 0.59
PRG3Q9Y2Y8 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PRG3Q9Y2Y8 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRG3Q9Y2Y8 AC002558.1-201ENST00000488906 803 ntBASIC18.73■□□□□ 0.59
PRG3Q9Y2Y8 IGHV3-65-201ENST00000523210 341 ntBASIC18.73■□□□□ 0.59
PRG3Q9Y2Y8 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRG3Q9Y2Y8 AC018845.2-201ENST00000568326 409 ntBASIC18.73■□□□□ 0.59
PRG3Q9Y2Y8 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.73■□□□□ 0.59
PRG3Q9Y2Y8 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRG3Q9Y2Y8 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRG3Q9Y2Y8 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PRG3Q9Y2Y8 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.73■□□□□ 0.59
PRG3Q9Y2Y8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRG3Q9Y2Y8 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.73■□□□□ 0.59
PRG3Q9Y2Y8 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.73■□□□□ 0.59
PRG3Q9Y2Y8 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.72■□□□□ 0.59
PRG3Q9Y2Y8 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.72■□□□□ 0.59
PRG3Q9Y2Y8 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PRG3Q9Y2Y8 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.72■□□□□ 0.59
PRG3Q9Y2Y8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PRG3Q9Y2Y8 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRG3Q9Y2Y8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
PRG3Q9Y2Y8 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRG3Q9Y2Y8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRG3Q9Y2Y8 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PRG3Q9Y2Y8 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRG3Q9Y2Y8 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRG3Q9Y2Y8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PRG3Q9Y2Y8 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PRG3Q9Y2Y8 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PRG3Q9Y2Y8 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRG3Q9Y2Y8 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRG3Q9Y2Y8 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms