Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 AC005104.2-201ENST00000427818 678 ntBASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 AC009947.2-201ENST00000444014 672 ntBASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 FITM1-202ENST00000559294 800 ntBASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 AC142381.4-202ENST00000563973 229 ntBASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 LINC01311-201ENST00000565162 1445 ntBASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBE2D4Q9Y2X8 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 AP000525.1-201ENST00000608286 694 ntBASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D4Q9Y2X8 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 TSPY14P-201ENST00000303979 915 ntBASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms