Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SHANK2Q9UPX8 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SHANK2Q9UPX8 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SHANK2Q9UPX8 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SHANK2Q9UPX8 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC25.88■■□□□ 1.73
SHANK2Q9UPX8 TSEN15P1-201ENST00000423257 515 ntBASIC25.88■■□□□ 1.73
SHANK2Q9UPX8 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
SHANK2Q9UPX8 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC25.88■■□□□ 1.73
SHANK2Q9UPX8 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC25.88■■□□□ 1.73
SHANK2Q9UPX8 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SHANK2Q9UPX8 HNRNPRP1-201ENST00000453465 1695 ntBASIC25.88■■□□□ 1.73
SHANK2Q9UPX8 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC25.88■■□□□ 1.73
SHANK2Q9UPX8 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SHANK2Q9UPX8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SHANK2Q9UPX8 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC25.88■■□□□ 1.73
SHANK2Q9UPX8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SHANK2Q9UPX8 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SHANK2Q9UPX8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
SHANK2Q9UPX8 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SHANK2Q9UPX8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SHANK2Q9UPX8 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SHANK2Q9UPX8 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SHANK2Q9UPX8 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC25.87■■□□□ 1.73
SHANK2Q9UPX8 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC25.87■■□□□ 1.73
SHANK2Q9UPX8 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC25.87■■□□□ 1.73
SHANK2Q9UPX8 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC25.87■■□□□ 1.73
SHANK2Q9UPX8 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC25.87■■□□□ 1.73
SHANK2Q9UPX8 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
SHANK2Q9UPX8 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
SHANK2Q9UPX8 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC25.87■■□□□ 1.73
SHANK2Q9UPX8 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC25.87■■□□□ 1.73
SHANK2Q9UPX8 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC25.87■■□□□ 1.73
SHANK2Q9UPX8 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SHANK2Q9UPX8 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SHANK2Q9UPX8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SHANK2Q9UPX8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SHANK2Q9UPX8 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
SHANK2Q9UPX8 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SHANK2Q9UPX8 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SHANK2Q9UPX8 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
SHANK2Q9UPX8 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
SHANK2Q9UPX8 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC25.86■■□□□ 1.73
SHANK2Q9UPX8 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SHANK2Q9UPX8 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC25.86■■□□□ 1.73
SHANK2Q9UPX8 PTMS-202ENST00000389462 773 ntTSL 2 BASIC25.86■■□□□ 1.73
SHANK2Q9UPX8 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SHANK2Q9UPX8 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SHANK2Q9UPX8 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC25.86■■□□□ 1.73
SHANK2Q9UPX8 PUDP-206ENST00000540122 825 ntTSL 2 BASIC25.86■■□□□ 1.73
SHANK2Q9UPX8 THTPA-204ENST00000554970 569 ntTSL 4 BASIC25.86■■□□□ 1.73
SHANK2Q9UPX8 THTPA-206ENST00000556015 535 ntTSL 3 BASIC25.86■■□□□ 1.73
SHANK2Q9UPX8 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC25.86■■□□□ 1.73
SHANK2Q9UPX8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC25.86■■□□□ 1.73
SHANK2Q9UPX8 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
SHANK2Q9UPX8 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SHANK2Q9UPX8 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SHANK2Q9UPX8 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
SHANK2Q9UPX8 LYSMD4-203ENST00000378904 2122 ntBASIC25.86■■□□□ 1.73
SHANK2Q9UPX8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC25.86■■□□□ 1.73
SHANK2Q9UPX8 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC25.86■■□□□ 1.73
SHANK2Q9UPX8 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC25.86■■□□□ 1.73
SHANK2Q9UPX8 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC25.86■■□□□ 1.73
SHANK2Q9UPX8 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC25.86■■□□□ 1.73
SHANK2Q9UPX8 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SHANK2Q9UPX8 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
SHANK2Q9UPX8 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SHANK2Q9UPX8 AL355306.1-201ENST00000415580 579 ntBASIC25.85■■□□□ 1.73
SHANK2Q9UPX8 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC25.85■■□□□ 1.73
SHANK2Q9UPX8 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC25.85■■□□□ 1.73
SHANK2Q9UPX8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
SHANK2Q9UPX8 AC129492.6-201ENST00000611383 1305 ntBASIC25.85■■□□□ 1.73
SHANK2Q9UPX8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SHANK2Q9UPX8 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC25.85■■□□□ 1.73
SHANK2Q9UPX8 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SHANK2Q9UPX8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
SHANK2Q9UPX8 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
SHANK2Q9UPX8 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
SHANK2Q9UPX8 SLC25A1P3-201ENST00000395415 828 ntBASIC25.85■■□□□ 1.73
SHANK2Q9UPX8 SLC25A6P5-201ENST00000435663 894 ntBASIC25.85■■□□□ 1.73
SHANK2Q9UPX8 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
SHANK2Q9UPX8 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SHANK2Q9UPX8 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC25.85■■□□□ 1.73
SHANK2Q9UPX8 METTL23-205ENST00000588302 925 ntTSL 5 BASIC25.85■■□□□ 1.73
SHANK2Q9UPX8 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC25.85■■□□□ 1.73
SHANK2Q9UPX8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC25.84■■□□□ 1.73
SHANK2Q9UPX8 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
SHANK2Q9UPX8 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
SHANK2Q9UPX8 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SHANK2Q9UPX8 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC25.84■■□□□ 1.73
SHANK2Q9UPX8 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC25.84■■□□□ 1.73
SHANK2Q9UPX8 GREM1-201ENST00000560677 623 ntTSL 4 BASIC25.84■■□□□ 1.73
SHANK2Q9UPX8 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SHANK2Q9UPX8 REM2-202ENST00000536884 1331 ntTSL 2 BASIC25.84■■□□□ 1.73
SHANK2Q9UPX8 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SHANK2Q9UPX8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SHANK2Q9UPX8 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
SHANK2Q9UPX8 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SHANK2Q9UPX8 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC25.83■■□□□ 1.73
SHANK2Q9UPX8 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC25.83■■□□□ 1.73
SHANK2Q9UPX8 AL139400.1-201ENST00000366220 510 ntBASIC25.83■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms