Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.16■□□□□ 0.82
PNMA3Q9UL41 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PNMA3Q9UL41 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.16■□□□□ 0.82
PNMA3Q9UL41 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.16■□□□□ 0.82
PNMA3Q9UL41 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PNMA3Q9UL41 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.16■□□□□ 0.82
PNMA3Q9UL41 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.16■□□□□ 0.82
PNMA3Q9UL41 AC002558.1-201ENST00000488906 803 ntBASIC20.16■□□□□ 0.82
PNMA3Q9UL41 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.16■□□□□ 0.82
PNMA3Q9UL41 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC20.16■□□□□ 0.82
PNMA3Q9UL41 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PNMA3Q9UL41 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.16■□□□□ 0.82
PNMA3Q9UL41 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.16■□□□□ 0.82
PNMA3Q9UL41 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PNMA3Q9UL41 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PNMA3Q9UL41 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.16■□□□□ 0.82
PNMA3Q9UL41 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PNMA3Q9UL41 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.16■□□□□ 0.82
PNMA3Q9UL41 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.16■□□□□ 0.82
PNMA3Q9UL41 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PNMA3Q9UL41 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PNMA3Q9UL41 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.16■□□□□ 0.82
PNMA3Q9UL41 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.15■□□□□ 0.82
PNMA3Q9UL41 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.15■□□□□ 0.82
PNMA3Q9UL41 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PNMA3Q9UL41 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
PNMA3Q9UL41 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PNMA3Q9UL41 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
PNMA3Q9UL41 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PNMA3Q9UL41 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
PNMA3Q9UL41 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PNMA3Q9UL41 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
PNMA3Q9UL41 AC004835.2-201ENST00000603762 682 ntBASIC20.15■□□□□ 0.82
PNMA3Q9UL41 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PNMA3Q9UL41 AC091812.2-201ENST00000619081 385 ntBASIC20.15■□□□□ 0.82
PNMA3Q9UL41 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PNMA3Q9UL41 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.15■□□□□ 0.82
PNMA3Q9UL41 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC20.15■□□□□ 0.82
PNMA3Q9UL41 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.15■□□□□ 0.82
PNMA3Q9UL41 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.15■□□□□ 0.82
PNMA3Q9UL41 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PNMA3Q9UL41 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
PNMA3Q9UL41 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PNMA3Q9UL41 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PNMA3Q9UL41 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PNMA3Q9UL41 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PNMA3Q9UL41 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.15■□□□□ 0.82
PNMA3Q9UL41 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PNMA3Q9UL41 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
PNMA3Q9UL41 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
PNMA3Q9UL41 LETM1P2-201ENST00000597330 2178 ntBASIC20.14■□□□□ 0.81
PNMA3Q9UL41 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.14■□□□□ 0.81
PNMA3Q9UL41 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.14■□□□□ 0.81
PNMA3Q9UL41 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PNMA3Q9UL41 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PNMA3Q9UL41 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.14■□□□□ 0.81
PNMA3Q9UL41 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.14■□□□□ 0.81
PNMA3Q9UL41 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PNMA3Q9UL41 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.14■□□□□ 0.81
PNMA3Q9UL41 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PNMA3Q9UL41 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.14■□□□□ 0.81
PNMA3Q9UL41 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.14■□□□□ 0.81
PNMA3Q9UL41 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.14■□□□□ 0.81
PNMA3Q9UL41 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PNMA3Q9UL41 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.14■□□□□ 0.81
PNMA3Q9UL41 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PNMA3Q9UL41 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PNMA3Q9UL41 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PNMA3Q9UL41 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PNMA3Q9UL41 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.14■□□□□ 0.81
PNMA3Q9UL41 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC20.14■□□□□ 0.81
PNMA3Q9UL41 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PNMA3Q9UL41 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.14■□□□□ 0.81
PNMA3Q9UL41 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC20.14■□□□□ 0.81
PNMA3Q9UL41 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.14■□□□□ 0.81
PNMA3Q9UL41 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PNMA3Q9UL41 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PNMA3Q9UL41 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.14■□□□□ 0.81
PNMA3Q9UL41 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
PNMA3Q9UL41 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.14■□□□□ 0.81
PNMA3Q9UL41 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
PNMA3Q9UL41 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
PNMA3Q9UL41 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PNMA3Q9UL41 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
PNMA3Q9UL41 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.13■□□□□ 0.81
PNMA3Q9UL41 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.13■□□□□ 0.81
PNMA3Q9UL41 PI4KAP1-204ENST00000612579 1703 ntBASIC20.13■□□□□ 0.81
PNMA3Q9UL41 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PNMA3Q9UL41 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PNMA3Q9UL41 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PNMA3Q9UL41 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PNMA3Q9UL41 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PNMA3Q9UL41 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PNMA3Q9UL41 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.13■□□□□ 0.81
PNMA3Q9UL41 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PNMA3Q9UL41 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.13■□□□□ 0.81
PNMA3Q9UL41 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.13■□□□□ 0.81
PNMA3Q9UL41 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
PNMA3Q9UL41 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PNMA3Q9UL41 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms