Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 AC092068.3-201ENST00000587894 2016 ntBASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 AC128676.1-201ENST00000454392 318 ntBASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 THEM4-205ENST00000489410 643 ntTSL 2 BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 HES2-206ENST00000489730 730 ntTSL 2 BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 TCAF2P1-201ENST00000291129 2421 ntBASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 TFP1-202ENST00000475455 1573 ntBASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
UBQLN2Q9UHD9 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 RPS2P52-201ENST00000469610 820 ntBASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 NME1-207ENST00000480143 964 ntTSL 2 BASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 IRX5-204ENST00000560154 879 ntTSL 5 BASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 AC233263.1-201ENST00000578059 224 ntBASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 AC120498.8-201ENST00000614275 531 ntBASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 ITM2C-210ENST00000620962 501 ntBASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 TMEM191A-211ENST00000637163 1067 ntBASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 AC073648.6-201ENST00000641589 218 ntBASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
UBQLN2Q9UHD9 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms