Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC27.53■■■□□ 2
RIMBP3Q9UFD9 AC018529.1-201ENST00000613063 361 ntBASIC27.53■■■□□ 2
RIMBP3Q9UFD9 PC-208ENST00000529047 1607 ntTSL 3 BASIC27.53■■■□□ 2
RIMBP3Q9UFD9 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
RIMBP3Q9UFD9 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
RIMBP3Q9UFD9 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC27.53■■■□□ 2
RIMBP3Q9UFD9 AC006538.1-201ENST00000567905 1585 ntBASIC27.53■■■□□ 2
RIMBP3Q9UFD9 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC27.52■■■□□ 2
RIMBP3Q9UFD9 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
RIMBP3Q9UFD9 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
RIMBP3Q9UFD9 AC093004.1-201ENST00000508850 424 ntBASIC27.52■■■□□ 2
RIMBP3Q9UFD9 AC135586.1-201ENST00000539323 574 ntBASIC27.52■■■□□ 2
RIMBP3Q9UFD9 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC27.52■■■□□ 2
RIMBP3Q9UFD9 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
RIMBP3Q9UFD9 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
RIMBP3Q9UFD9 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC27.52■■■□□ 2
RIMBP3Q9UFD9 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
RIMBP3Q9UFD9 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
RIMBP3Q9UFD9 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
RIMBP3Q9UFD9 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC27.52■■■□□ 2
RIMBP3Q9UFD9 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC27.52■■■□□ 2
RIMBP3Q9UFD9 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC27.52■■■□□ 2
RIMBP3Q9UFD9 AC109635.5-201ENST00000533593 962 ntBASIC27.52■■■□□ 2
RIMBP3Q9UFD9 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
RIMBP3Q9UFD9 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
RIMBP3Q9UFD9 FLYWCH1P1-201ENST00000460917 1874 ntBASIC27.51■■■□□ 2
RIMBP3Q9UFD9 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■■□□ 2
RIMBP3Q9UFD9 AL499627.1-201ENST00000569373 2188 ntBASIC27.51■■■□□ 2
RIMBP3Q9UFD9 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC27.51■■■□□ 2
RIMBP3Q9UFD9 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
RIMBP3Q9UFD9 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
RIMBP3Q9UFD9 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
RIMBP3Q9UFD9 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC27.51■■□□□ 1.99
RIMBP3Q9UFD9 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
RIMBP3Q9UFD9 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC27.51■■□□□ 1.99
RIMBP3Q9UFD9 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
RIMBP3Q9UFD9 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
RIMBP3Q9UFD9 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
RIMBP3Q9UFD9 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
RIMBP3Q9UFD9 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC27.5■■□□□ 1.99
RIMBP3Q9UFD9 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC27.5■■□□□ 1.99
RIMBP3Q9UFD9 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC27.5■■□□□ 1.99
RIMBP3Q9UFD9 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
RIMBP3Q9UFD9 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC27.5■■□□□ 1.99
RIMBP3Q9UFD9 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC27.5■■□□□ 1.99
RIMBP3Q9UFD9 SPDYE18-201ENST00000510091 1050 ntBASIC27.5■■□□□ 1.99
RIMBP3Q9UFD9 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC27.5■■□□□ 1.99
RIMBP3Q9UFD9 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC27.5■■□□□ 1.99
RIMBP3Q9UFD9 RARRES2P9-201ENST00000565168 469 ntBASIC27.5■■□□□ 1.99
RIMBP3Q9UFD9 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC27.5■■□□□ 1.99
RIMBP3Q9UFD9 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
RIMBP3Q9UFD9 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
RIMBP3Q9UFD9 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC27.5■■□□□ 1.99
RIMBP3Q9UFD9 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC27.5■■□□□ 1.99
RIMBP3Q9UFD9 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC27.5■■□□□ 1.99
RIMBP3Q9UFD9 AC007389.4-201ENST00000454674 793 ntBASIC27.49■■□□□ 1.99
RIMBP3Q9UFD9 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC27.49■■□□□ 1.99
RIMBP3Q9UFD9 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC27.49■■□□□ 1.99
RIMBP3Q9UFD9 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC27.49■■□□□ 1.99
RIMBP3Q9UFD9 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
RIMBP3Q9UFD9 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
RIMBP3Q9UFD9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
RIMBP3Q9UFD9 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
RIMBP3Q9UFD9 STK25-234ENST00000535007 2459 ntTSL 2 BASIC27.49■■□□□ 1.99
RIMBP3Q9UFD9 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC27.49■■□□□ 1.99
RIMBP3Q9UFD9 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
RIMBP3Q9UFD9 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
RIMBP3Q9UFD9 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC27.49■■□□□ 1.99
RIMBP3Q9UFD9 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC27.49■■□□□ 1.99
RIMBP3Q9UFD9 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
RIMBP3Q9UFD9 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
RIMBP3Q9UFD9 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
RIMBP3Q9UFD9 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC27.49■■□□□ 1.99
RIMBP3Q9UFD9 ZNF890P-202ENST00000530367 1156 ntBASIC27.49■■□□□ 1.99
RIMBP3Q9UFD9 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC27.49■■□□□ 1.99
RIMBP3Q9UFD9 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC27.49■■□□□ 1.99
RIMBP3Q9UFD9 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC27.49■■□□□ 1.99
RIMBP3Q9UFD9 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC27.48■■□□□ 1.99
RIMBP3Q9UFD9 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC27.48■■□□□ 1.99
RIMBP3Q9UFD9 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC27.48■■□□□ 1.99
RIMBP3Q9UFD9 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
RIMBP3Q9UFD9 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
RIMBP3Q9UFD9 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
RIMBP3Q9UFD9 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
RIMBP3Q9UFD9 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
RIMBP3Q9UFD9 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC27.48■■□□□ 1.99
RIMBP3Q9UFD9 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC27.48■■□□□ 1.99
RIMBP3Q9UFD9 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
RIMBP3Q9UFD9 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
RIMBP3Q9UFD9 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC27.48■■□□□ 1.99
RIMBP3Q9UFD9 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC27.48■■□□□ 1.99
RIMBP3Q9UFD9 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC27.48■■□□□ 1.99
RIMBP3Q9UFD9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC27.47■■□□□ 1.99
RIMBP3Q9UFD9 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.99
RIMBP3Q9UFD9 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
RIMBP3Q9UFD9 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
RIMBP3Q9UFD9 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC27.47■■□□□ 1.99
RIMBP3Q9UFD9 SPDYE19P-201ENST00000338590 713 ntBASIC27.47■■□□□ 1.99
RIMBP3Q9UFD9 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC27.47■■□□□ 1.99
RIMBP3Q9UFD9 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC27.47■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms