Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.96■□□□□ 0.31
LRIT1Q9P2V4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRIT1Q9P2V4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRIT1Q9P2V4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRIT1Q9P2V4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRIT1Q9P2V4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.96■□□□□ 0.31
LRIT1Q9P2V4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
LRIT1Q9P2V4 AC005104.2-201ENST00000427818 678 ntBASIC16.96■□□□□ 0.31
LRIT1Q9P2V4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.96■□□□□ 0.31
LRIT1Q9P2V4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.96■□□□□ 0.31
LRIT1Q9P2V4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.96■□□□□ 0.31
LRIT1Q9P2V4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRIT1Q9P2V4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.96■□□□□ 0.31
LRIT1Q9P2V4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRIT1Q9P2V4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRIT1Q9P2V4 BICD1-207ENST00000551848 1962 ntBASIC16.96■□□□□ 0.31
LRIT1Q9P2V4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRIT1Q9P2V4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LRIT1Q9P2V4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRIT1Q9P2V4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRIT1Q9P2V4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.96■□□□□ 0.31
LRIT1Q9P2V4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRIT1Q9P2V4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRIT1Q9P2V4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRIT1Q9P2V4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRIT1Q9P2V4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRIT1Q9P2V4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.96■□□□□ 0.3
LRIT1Q9P2V4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
LRIT1Q9P2V4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.96■□□□□ 0.3
LRIT1Q9P2V4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
LRIT1Q9P2V4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.96■□□□□ 0.3
LRIT1Q9P2V4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 AC135050.7-201ENST00000624508 2218 ntBASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 ELK2BP-201ENST00000415014 1224 ntBASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 UPF3AP3-201ENST00000420996 769 ntBASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 AC064836.3-201ENST00000607928 673 ntBASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRIT1Q9P2V4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRIT1Q9P2V4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
LRIT1Q9P2V4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
LRIT1Q9P2V4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRIT1Q9P2V4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRIT1Q9P2V4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
LRIT1Q9P2V4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
LRIT1Q9P2V4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRIT1Q9P2V4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRIT1Q9P2V4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRIT1Q9P2V4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
LRIT1Q9P2V4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRIT1Q9P2V4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRIT1Q9P2V4 YBX2P1-201ENST00000394192 760 ntBASIC16.94■□□□□ 0.3
LRIT1Q9P2V4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
LRIT1Q9P2V4 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.94■□□□□ 0.3
LRIT1Q9P2V4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
LRIT1Q9P2V4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.94■□□□□ 0.3
LRIT1Q9P2V4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
LRIT1Q9P2V4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.94■□□□□ 0.3
LRIT1Q9P2V4 MIR3687-2-201ENST00000577708 61 ntBASIC16.94■□□□□ 0.3
LRIT1Q9P2V4 AC010327.4-202ENST00000591484 748 ntBASIC16.94■□□□□ 0.3
LRIT1Q9P2V4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.94■□□□□ 0.3
LRIT1Q9P2V4 MIR3687-1-201ENST00000614492 61 ntBASIC16.94■□□□□ 0.3
LRIT1Q9P2V4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.94■□□□□ 0.3
LRIT1Q9P2V4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.94■□□□□ 0.3
LRIT1Q9P2V4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.94■□□□□ 0.3
LRIT1Q9P2V4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRIT1Q9P2V4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms