Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CXXC1Q9P0U4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CXXC1Q9P0U4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
CXXC1Q9P0U4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CXXC1Q9P0U4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CXXC1Q9P0U4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CXXC1Q9P0U4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CXXC1Q9P0U4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CXXC1Q9P0U4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CXXC1Q9P0U4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CXXC1Q9P0U4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CXXC1Q9P0U4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CXXC1Q9P0U4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.72■□□□□ 0.59
CXXC1Q9P0U4 AC107890.1-201ENST00000422478 521 ntBASIC18.72■□□□□ 0.59
CXXC1Q9P0U4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.72■□□□□ 0.59
CXXC1Q9P0U4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.72■□□□□ 0.59
CXXC1Q9P0U4 SLC25A6P2-201ENST00000497974 877 ntBASIC18.72■□□□□ 0.59
CXXC1Q9P0U4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.72■□□□□ 0.59
CXXC1Q9P0U4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.72■□□□□ 0.59
CXXC1Q9P0U4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.72■□□□□ 0.59
CXXC1Q9P0U4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.72■□□□□ 0.59
CXXC1Q9P0U4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.72■□□□□ 0.59
CXXC1Q9P0U4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CXXC1Q9P0U4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CXXC1Q9P0U4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CXXC1Q9P0U4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CXXC1Q9P0U4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CXXC1Q9P0U4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.72■□□□□ 0.59
CXXC1Q9P0U4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CXXC1Q9P0U4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CXXC1Q9P0U4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.72■□□□□ 0.59
CXXC1Q9P0U4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.71■□□□□ 0.59
CXXC1Q9P0U4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
CXXC1Q9P0U4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CXXC1Q9P0U4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CXXC1Q9P0U4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.71■□□□□ 0.59
CXXC1Q9P0U4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CXXC1Q9P0U4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.71■□□□□ 0.59
CXXC1Q9P0U4 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.71■□□□□ 0.59
CXXC1Q9P0U4 TREML5P-201ENST00000421694 576 ntBASIC18.71■□□□□ 0.59
CXXC1Q9P0U4 ACTG1P4-201ENST00000425123 1122 ntBASIC18.71■□□□□ 0.59
CXXC1Q9P0U4 AC140658.5-201ENST00000438532 169 ntBASIC18.71■□□□□ 0.59
CXXC1Q9P0U4 SLC25A39P2-201ENST00000537614 270 ntBASIC18.71■□□□□ 0.59
CXXC1Q9P0U4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.71■□□□□ 0.59
CXXC1Q9P0U4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CXXC1Q9P0U4 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.71■□□□□ 0.59
CXXC1Q9P0U4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CXXC1Q9P0U4 AL390754.1-201ENST00000619088 582 ntBASIC18.71■□□□□ 0.59
CXXC1Q9P0U4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.71■□□□□ 0.59
CXXC1Q9P0U4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.71■□□□□ 0.59
CXXC1Q9P0U4 AL096828.2-201ENST00000567259 1965 ntBASIC18.71■□□□□ 0.59
CXXC1Q9P0U4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CXXC1Q9P0U4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.71■□□□□ 0.59
CXXC1Q9P0U4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CXXC1Q9P0U4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CXXC1Q9P0U4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
CXXC1Q9P0U4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CXXC1Q9P0U4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CXXC1Q9P0U4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CXXC1Q9P0U4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CXXC1Q9P0U4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CXXC1Q9P0U4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CXXC1Q9P0U4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CXXC1Q9P0U4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CXXC1Q9P0U4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.7■□□□□ 0.58
CXXC1Q9P0U4 FAM207CP-201ENST00000443486 507 ntBASIC18.7■□□□□ 0.58
CXXC1Q9P0U4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CXXC1Q9P0U4 AC125807.1-201ENST00000483097 614 ntBASIC18.7■□□□□ 0.58
CXXC1Q9P0U4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CXXC1Q9P0U4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CXXC1Q9P0U4 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.7■□□□□ 0.58
CXXC1Q9P0U4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.7■□□□□ 0.58
CXXC1Q9P0U4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.7■□□□□ 0.58
CXXC1Q9P0U4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CXXC1Q9P0U4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CXXC1Q9P0U4 AL359881.2-201ENST00000602973 570 ntBASIC18.7■□□□□ 0.58
CXXC1Q9P0U4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CXXC1Q9P0U4 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.7■□□□□ 0.58
CXXC1Q9P0U4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.7■□□□□ 0.58
CXXC1Q9P0U4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.7■□□□□ 0.58
CXXC1Q9P0U4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CXXC1Q9P0U4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CXXC1Q9P0U4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CXXC1Q9P0U4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CXXC1Q9P0U4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CXXC1Q9P0U4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.7■□□□□ 0.58
CXXC1Q9P0U4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
CXXC1Q9P0U4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CXXC1Q9P0U4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.69■□□□□ 0.58
CXXC1Q9P0U4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.69■□□□□ 0.58
CXXC1Q9P0U4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.69■□□□□ 0.58
CXXC1Q9P0U4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.69■□□□□ 0.58
CXXC1Q9P0U4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CXXC1Q9P0U4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.69■□□□□ 0.58
CXXC1Q9P0U4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CXXC1Q9P0U4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CXXC1Q9P0U4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.69■□□□□ 0.58
CXXC1Q9P0U4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CXXC1Q9P0U4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CXXC1Q9P0U4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms