Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.65□□□□□ -0.06
LIN7CQ9NUP9 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 AL359075.1-203ENST00000462729 1002 ntBASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 AL157888.1-201ENST00000631930 593 ntBASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LIN7CQ9NUP9 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LIN7CQ9NUP9 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LIN7CQ9NUP9 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LIN7CQ9NUP9 AC099398.1-201ENST00000567919 2776 ntBASIC14.63□□□□□ -0.07
LIN7CQ9NUP9 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LIN7CQ9NUP9 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LIN7CQ9NUP9 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LIN7CQ9NUP9 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
LIN7CQ9NUP9 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.63□□□□□ -0.07
LIN7CQ9NUP9 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LIN7CQ9NUP9 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.63□□□□□ -0.07
LIN7CQ9NUP9 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LIN7CQ9NUP9 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.63□□□□□ -0.07
LIN7CQ9NUP9 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.63□□□□□ -0.07
LIN7CQ9NUP9 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LIN7CQ9NUP9 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms