Protein–RNA interactions for Protein: Q9NS15

LTBP3, Latent-transforming growth factor beta-binding protein 3, humanhuman

Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3Q9NS15 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LTBP3Q9NS15 NAA50-208ENST00000497255 789 ntTSL 5 BASIC20.94■□□□□ 0.94
LTBP3Q9NS15 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.94■□□□□ 0.94
LTBP3Q9NS15 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC20.94■□□□□ 0.94
LTBP3Q9NS15 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC20.94■□□□□ 0.94
LTBP3Q9NS15 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.94■□□□□ 0.94
LTBP3Q9NS15 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LTBP3Q9NS15 SERF2-217ENST00000630046 862 ntTSL 5 BASIC20.94■□□□□ 0.94
LTBP3Q9NS15 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LTBP3Q9NS15 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
LTBP3Q9NS15 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
LTBP3Q9NS15 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
LTBP3Q9NS15 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LTBP3Q9NS15 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LTBP3Q9NS15 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.93■□□□□ 0.94
LTBP3Q9NS15 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC20.93■□□□□ 0.94
LTBP3Q9NS15 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.93■□□□□ 0.94
LTBP3Q9NS15 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LTBP3Q9NS15 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
LTBP3Q9NS15 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC20.93■□□□□ 0.94
LTBP3Q9NS15 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC20.93■□□□□ 0.94
LTBP3Q9NS15 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LTBP3Q9NS15 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.93■□□□□ 0.94
LTBP3Q9NS15 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC20.93■□□□□ 0.94
LTBP3Q9NS15 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC20.93■□□□□ 0.94
LTBP3Q9NS15 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LTBP3Q9NS15 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LTBP3Q9NS15 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
LTBP3Q9NS15 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LTBP3Q9NS15 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC20.93■□□□□ 0.94
LTBP3Q9NS15 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
LTBP3Q9NS15 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
LTBP3Q9NS15 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
LTBP3Q9NS15 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LTBP3Q9NS15 CALY-202ENST00000368555 783 ntTSL 2 BASIC20.92■□□□□ 0.94
LTBP3Q9NS15 AC241585.1-201ENST00000433527 519 ntBASIC20.92■□□□□ 0.94
LTBP3Q9NS15 RN7SL692P-201ENST00000464677 288 ntBASIC20.92■□□□□ 0.94
LTBP3Q9NS15 AC109635.5-201ENST00000533593 962 ntBASIC20.92■□□□□ 0.94
LTBP3Q9NS15 COQ9-214ENST00000567933 882 ntTSL 3 BASIC20.92■□□□□ 0.94
LTBP3Q9NS15 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.92■□□□□ 0.94
LTBP3Q9NS15 AL009183.1-201ENST00000603760 355 ntBASIC20.92■□□□□ 0.94
LTBP3Q9NS15 AC009118.2-201ENST00000613275 655 ntBASIC20.92■□□□□ 0.94
LTBP3Q9NS15 MIR6080-201ENST00000617359 66 ntBASIC20.92■□□□□ 0.94
LTBP3Q9NS15 SRP9-204ENST00000619790 377 ntTSL 2 BASIC20.92■□□□□ 0.94
LTBP3Q9NS15 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC20.92■□□□□ 0.94
LTBP3Q9NS15 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.92■□□□□ 0.94
LTBP3Q9NS15 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LTBP3Q9NS15 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC20.92■□□□□ 0.94
LTBP3Q9NS15 UXT-AS1-201ENST00000590504 1525 ntBASIC20.92■□□□□ 0.94
LTBP3Q9NS15 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LTBP3Q9NS15 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
LTBP3Q9NS15 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
LTBP3Q9NS15 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LTBP3Q9NS15 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LTBP3Q9NS15 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LTBP3Q9NS15 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.91■□□□□ 0.94
LTBP3Q9NS15 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LTBP3Q9NS15 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LTBP3Q9NS15 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.91■□□□□ 0.94
LTBP3Q9NS15 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LTBP3Q9NS15 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
LTBP3Q9NS15 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LTBP3Q9NS15 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LTBP3Q9NS15 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LTBP3Q9NS15 HMGA1P7-201ENST00000406908 502 ntBASIC20.91■□□□□ 0.94
LTBP3Q9NS15 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC20.91■□□□□ 0.94
LTBP3Q9NS15 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC20.91■□□□□ 0.94
LTBP3Q9NS15 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC20.91■□□□□ 0.94
LTBP3Q9NS15 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
LTBP3Q9NS15 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.91■□□□□ 0.94
LTBP3Q9NS15 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LTBP3Q9NS15 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LTBP3Q9NS15 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.91■□□□□ 0.94
LTBP3Q9NS15 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.91■□□□□ 0.94
LTBP3Q9NS15 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LTBP3Q9NS15 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.91■□□□□ 0.94
LTBP3Q9NS15 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LTBP3Q9NS15 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LTBP3Q9NS15 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LTBP3Q9NS15 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
LTBP3Q9NS15 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.9■□□□□ 0.94
LTBP3Q9NS15 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
LTBP3Q9NS15 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LTBP3Q9NS15 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
LTBP3Q9NS15 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC20.9■□□□□ 0.94
LTBP3Q9NS15 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC20.9■□□□□ 0.94
LTBP3Q9NS15 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC20.9■□□□□ 0.94
LTBP3Q9NS15 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
LTBP3Q9NS15 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LTBP3Q9NS15 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.9■□□□□ 0.94
LTBP3Q9NS15 ALG1L8P-201ENST00000533887 760 ntBASIC20.9■□□□□ 0.94
LTBP3Q9NS15 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.9■□□□□ 0.94
LTBP3Q9NS15 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC20.9■□□□□ 0.94
LTBP3Q9NS15 COQ4-205ENST00000609948 956 ntTSL 2 BASIC20.9■□□□□ 0.94
LTBP3Q9NS15 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC20.9■□□□□ 0.94
LTBP3Q9NS15 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC20.9■□□□□ 0.94
LTBP3Q9NS15 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC20.9■□□□□ 0.94
LTBP3Q9NS15 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.9■□□□□ 0.94
LTBP3Q9NS15 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.9■□□□□ 0.94
LTBP3Q9NS15 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms