Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 RCN1P2-201ENST00000398357 915 ntBASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 IGHV3-52-201ENST00000519770 353 ntBASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 CLEC4GP1-201ENST00000596555 870 ntBASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 AC006116.8-202ENST00000587620 1550 ntBASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 GNAS-203ENST00000306120 1878 ntBASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.16■□□□□ 0.18
SDHAF3Q9NRP4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SDHAF3Q9NRP4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SDHAF3Q9NRP4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SDHAF3Q9NRP4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SDHAF3Q9NRP4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SDHAF3Q9NRP4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SDHAF3Q9NRP4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.15■□□□□ 0.18
SDHAF3Q9NRP4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SDHAF3Q9NRP4 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SDHAF3Q9NRP4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.15■□□□□ 0.18
SDHAF3Q9NRP4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SDHAF3Q9NRP4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SDHAF3Q9NRP4 MYCLP1-201ENST00000372451 1075 ntBASIC16.15■□□□□ 0.18
SDHAF3Q9NRP4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SDHAF3Q9NRP4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SDHAF3Q9NRP4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SDHAF3Q9NRP4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
SDHAF3Q9NRP4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.15■□□□□ 0.18
SDHAF3Q9NRP4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.15■□□□□ 0.18
SDHAF3Q9NRP4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.15■□□□□ 0.18
SDHAF3Q9NRP4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SDHAF3Q9NRP4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.15■□□□□ 0.18
SDHAF3Q9NRP4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.15■□□□□ 0.18
SDHAF3Q9NRP4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.15■□□□□ 0.18
SDHAF3Q9NRP4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.15■□□□□ 0.18
SDHAF3Q9NRP4 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SDHAF3Q9NRP4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SDHAF3Q9NRP4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
SDHAF3Q9NRP4 NOC2LP2-201ENST00000407594 1944 ntBASIC16.15■□□□□ 0.18
SDHAF3Q9NRP4 INTS4P1-201ENST00000438455 1935 ntBASIC16.15■□□□□ 0.18
SDHAF3Q9NRP4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.15■□□□□ 0.18
SDHAF3Q9NRP4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SDHAF3Q9NRP4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SDHAF3Q9NRP4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.15■□□□□ 0.18
SDHAF3Q9NRP4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.14■□□□□ 0.18
SDHAF3Q9NRP4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.14■□□□□ 0.18
SDHAF3Q9NRP4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SDHAF3Q9NRP4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
SDHAF3Q9NRP4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SDHAF3Q9NRP4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SDHAF3Q9NRP4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SDHAF3Q9NRP4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SDHAF3Q9NRP4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SDHAF3Q9NRP4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms