Protein–RNA interactions for Protein: Q9NR81

ARHGEF3, Rho guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3Q9NR81 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ARHGEF3Q9NR81 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ARHGEF3Q9NR81 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
ARHGEF3Q9NR81 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ARHGEF3Q9NR81 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ARHGEF3Q9NR81 RPS8P6-201ENST00000426177 609 ntBASIC18.6■□□□□ 0.57
ARHGEF3Q9NR81 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.6■□□□□ 0.57
ARHGEF3Q9NR81 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.6■□□□□ 0.57
ARHGEF3Q9NR81 KRT18P3-201ENST00000451602 1288 ntBASIC18.6■□□□□ 0.57
ARHGEF3Q9NR81 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.6■□□□□ 0.57
ARHGEF3Q9NR81 MIR3687-2-201ENST00000577708 61 ntBASIC18.6■□□□□ 0.57
ARHGEF3Q9NR81 MIR3687-1-201ENST00000614492 61 ntBASIC18.6■□□□□ 0.57
ARHGEF3Q9NR81 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.6■□□□□ 0.57
ARHGEF3Q9NR81 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.6■□□□□ 0.57
ARHGEF3Q9NR81 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.6■□□□□ 0.57
ARHGEF3Q9NR81 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ARHGEF3Q9NR81 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ARHGEF3Q9NR81 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ARHGEF3Q9NR81 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ARHGEF3Q9NR81 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ARHGEF3Q9NR81 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.6■□□□□ 0.57
ARHGEF3Q9NR81 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ARHGEF3Q9NR81 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.6■□□□□ 0.57
ARHGEF3Q9NR81 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ARHGEF3Q9NR81 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ARHGEF3Q9NR81 AC012317.2-201ENST00000623305 2251 ntBASIC18.6■□□□□ 0.57
ARHGEF3Q9NR81 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ARHGEF3Q9NR81 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARHGEF3Q9NR81 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.59■□□□□ 0.57
ARHGEF3Q9NR81 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.59■□□□□ 0.57
ARHGEF3Q9NR81 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.59■□□□□ 0.57
ARHGEF3Q9NR81 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARHGEF3Q9NR81 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ARHGEF3Q9NR81 AP005117.1-201ENST00000584346 1413 ntBASIC18.59■□□□□ 0.57
ARHGEF3Q9NR81 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ARHGEF3Q9NR81 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ARHGEF3Q9NR81 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.59■□□□□ 0.57
ARHGEF3Q9NR81 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ARHGEF3Q9NR81 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.59■□□□□ 0.57
ARHGEF3Q9NR81 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARHGEF3Q9NR81 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.59■□□□□ 0.57
ARHGEF3Q9NR81 DNAJB3-201ENST00000446806 729 ntBASIC18.59■□□□□ 0.57
ARHGEF3Q9NR81 AC068472.1-201ENST00000474589 881 ntBASIC18.59■□□□□ 0.57
ARHGEF3Q9NR81 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.59■□□□□ 0.57
ARHGEF3Q9NR81 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.59■□□□□ 0.57
ARHGEF3Q9NR81 AC027796.2-201ENST00000575326 344 ntBASIC18.59■□□□□ 0.57
ARHGEF3Q9NR81 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.59■□□□□ 0.57
ARHGEF3Q9NR81 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.59■□□□□ 0.57
ARHGEF3Q9NR81 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.59■□□□□ 0.57
ARHGEF3Q9NR81 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ARHGEF3Q9NR81 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARHGEF3Q9NR81 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARHGEF3Q9NR81 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.59■□□□□ 0.57
ARHGEF3Q9NR81 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARHGEF3Q9NR81 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARHGEF3Q9NR81 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARHGEF3Q9NR81 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.59■□□□□ 0.57
ARHGEF3Q9NR81 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.59■□□□□ 0.57
ARHGEF3Q9NR81 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARHGEF3Q9NR81 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ARHGEF3Q9NR81 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ARHGEF3Q9NR81 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ARHGEF3Q9NR81 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ARHGEF3Q9NR81 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
ARHGEF3Q9NR81 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
ARHGEF3Q9NR81 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.58■□□□□ 0.57
ARHGEF3Q9NR81 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
ARHGEF3Q9NR81 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ARHGEF3Q9NR81 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ARHGEF3Q9NR81 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.58■□□□□ 0.57
ARHGEF3Q9NR81 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ARHGEF3Q9NR81 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.58■□□□□ 0.56
ARHGEF3Q9NR81 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ARHGEF3Q9NR81 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
ARHGEF3Q9NR81 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ARHGEF3Q9NR81 YBX2P1-201ENST00000394192 760 ntBASIC18.58■□□□□ 0.56
ARHGEF3Q9NR81 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ARHGEF3Q9NR81 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.58■□□□□ 0.56
ARHGEF3Q9NR81 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.58■□□□□ 0.56
ARHGEF3Q9NR81 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.58■□□□□ 0.56
ARHGEF3Q9NR81 AC004967.1-201ENST00000453589 447 ntBASIC18.58■□□□□ 0.56
ARHGEF3Q9NR81 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.58■□□□□ 0.56
ARHGEF3Q9NR81 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.58■□□□□ 0.56
ARHGEF3Q9NR81 OR7E14P-202ENST00000530490 1290 ntBASIC18.58■□□□□ 0.56
ARHGEF3Q9NR81 AC040169.1-201ENST00000565382 521 ntBASIC18.58■□□□□ 0.56
ARHGEF3Q9NR81 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.58■□□□□ 0.56
ARHGEF3Q9NR81 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.58■□□□□ 0.56
ARHGEF3Q9NR81 LINC02084-201ENST00000606069 1096 ntBASIC18.58■□□□□ 0.56
ARHGEF3Q9NR81 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ARHGEF3Q9NR81 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ARHGEF3Q9NR81 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.58■□□□□ 0.56
ARHGEF3Q9NR81 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
ARHGEF3Q9NR81 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.58■□□□□ 0.56
ARHGEF3Q9NR81 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
ARHGEF3Q9NR81 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ARHGEF3Q9NR81 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ARHGEF3Q9NR81 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
ARHGEF3Q9NR81 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
ARHGEF3Q9NR81 AL645608.8-201ENST00000606034 2086 ntBASIC18.58■□□□□ 0.56
ARHGEF3Q9NR81 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms