Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TM9SF3Q9HD45 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF3Q9HD45 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.57■□□□□ 0.4
TM9SF3Q9HD45 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.57■□□□□ 0.4
TM9SF3Q9HD45 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF3Q9HD45 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF3Q9HD45 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF3Q9HD45 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TM9SF3Q9HD45 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TM9SF3Q9HD45 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF3Q9HD45 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.57■□□□□ 0.4
TM9SF3Q9HD45 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF3Q9HD45 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF3Q9HD45 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TM9SF3Q9HD45 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF3Q9HD45 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF3Q9HD45 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF3Q9HD45 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF3Q9HD45 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.57■□□□□ 0.4
TM9SF3Q9HD45 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.57■□□□□ 0.4
TM9SF3Q9HD45 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF3Q9HD45 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF3Q9HD45 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.57■□□□□ 0.4
TM9SF3Q9HD45 AC010327.4-202ENST00000591484 748 ntBASIC17.57■□□□□ 0.4
TM9SF3Q9HD45 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.57■□□□□ 0.4
TM9SF3Q9HD45 AD001527.2-201ENST00000622994 785 ntBASIC17.57■□□□□ 0.4
TM9SF3Q9HD45 AC073592.4-201ENST00000623827 446 ntBASIC17.57■□□□□ 0.4
TM9SF3Q9HD45 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.57■□□□□ 0.4
TM9SF3Q9HD45 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.57■□□□□ 0.4
TM9SF3Q9HD45 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF3Q9HD45 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF3Q9HD45 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF3Q9HD45 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF3Q9HD45 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF3Q9HD45 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM9SF3Q9HD45 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.57■□□□□ 0.4
TM9SF3Q9HD45 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 RPSAP43-201ENST00000402237 625 ntBASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 AC007967.2-201ENST00000432613 625 ntBASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 AC009947.1-201ENST00000444350 727 ntBASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 RNA5SP416-201ENST00000516838 111 ntBASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 AC040169.1-201ENST00000565382 521 ntBASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM9SF3Q9HD45 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TM9SF3Q9HD45 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.55■□□□□ 0.4
TM9SF3Q9HD45 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM9SF3Q9HD45 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM9SF3Q9HD45 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TM9SF3Q9HD45 AC067852.2-201ENST00000590513 2313 ntBASIC17.55■□□□□ 0.4
TM9SF3Q9HD45 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM9SF3Q9HD45 KRT8P47-201ENST00000604727 1398 ntBASIC17.55■□□□□ 0.4
TM9SF3Q9HD45 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM9SF3Q9HD45 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM9SF3Q9HD45 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TM9SF3Q9HD45 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
TM9SF3Q9HD45 YBX2P1-201ENST00000394192 760 ntBASIC17.55■□□□□ 0.4
TM9SF3Q9HD45 GPX1P2-201ENST00000429271 606 ntBASIC17.55■□□□□ 0.4
TM9SF3Q9HD45 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.55■□□□□ 0.4
TM9SF3Q9HD45 AC004817.3-201ENST00000602957 2129 ntBASIC17.55■□□□□ 0.4
TM9SF3Q9HD45 AL139424.1-201ENST00000607572 797 ntBASIC17.55■□□□□ 0.4
TM9SF3Q9HD45 MIR1199-201ENST00000621445 119 ntBASIC17.55■□□□□ 0.4
TM9SF3Q9HD45 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.55■□□□□ 0.4
TM9SF3Q9HD45 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM9SF3Q9HD45 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TM9SF3Q9HD45 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
TM9SF3Q9HD45 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TM9SF3Q9HD45 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM9SF3Q9HD45 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM9SF3Q9HD45 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.54■□□□□ 0.4
TM9SF3Q9HD45 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms