Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SH2D4AQ9H788 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SH2D4AQ9H788 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SH2D4AQ9H788 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.45■□□□□ 0.86
SH2D4AQ9H788 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.45■□□□□ 0.86
SH2D4AQ9H788 ELK2BP-201ENST00000415014 1224 ntBASIC20.45■□□□□ 0.86
SH2D4AQ9H788 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SH2D4AQ9H788 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.45■□□□□ 0.86
SH2D4AQ9H788 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.45■□□□□ 0.86
SH2D4AQ9H788 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.45■□□□□ 0.86
SH2D4AQ9H788 AC009336.1-201ENST00000608941 1553 ntBASIC20.45■□□□□ 0.86
SH2D4AQ9H788 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.45■□□□□ 0.86
SH2D4AQ9H788 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
SH2D4AQ9H788 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SH2D4AQ9H788 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.45■□□□□ 0.86
SH2D4AQ9H788 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.45■□□□□ 0.86
SH2D4AQ9H788 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SH2D4AQ9H788 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SH2D4AQ9H788 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SH2D4AQ9H788 AC138932.1-201ENST00000534164 6830 ntBASIC20.44■□□□□ 0.86
SH2D4AQ9H788 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SH2D4AQ9H788 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.44■□□□□ 0.86
SH2D4AQ9H788 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.44■□□□□ 0.86
SH2D4AQ9H788 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SH2D4AQ9H788 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SH2D4AQ9H788 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SH2D4AQ9H788 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
SH2D4AQ9H788 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SH2D4AQ9H788 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SH2D4AQ9H788 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.44■□□□□ 0.86
SH2D4AQ9H788 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.44■□□□□ 0.86
SH2D4AQ9H788 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.44■□□□□ 0.86
SH2D4AQ9H788 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.44■□□□□ 0.86
SH2D4AQ9H788 AL139424.1-201ENST00000607572 797 ntBASIC20.44■□□□□ 0.86
SH2D4AQ9H788 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
SH2D4AQ9H788 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SH2D4AQ9H788 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.44■□□□□ 0.86
SH2D4AQ9H788 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SH2D4AQ9H788 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SH2D4AQ9H788 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SH2D4AQ9H788 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SH2D4AQ9H788 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SH2D4AQ9H788 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SH2D4AQ9H788 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SH2D4AQ9H788 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.43■□□□□ 0.86
SH2D4AQ9H788 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
SH2D4AQ9H788 AL354751.1-201ENST00000412768 1863 ntBASIC20.43■□□□□ 0.86
SH2D4AQ9H788 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SH2D4AQ9H788 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SH2D4AQ9H788 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SH2D4AQ9H788 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SH2D4AQ9H788 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SH2D4AQ9H788 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SH2D4AQ9H788 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.43■□□□□ 0.86
SH2D4AQ9H788 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.43■□□□□ 0.86
SH2D4AQ9H788 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SH2D4AQ9H788 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SH2D4AQ9H788 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.43■□□□□ 0.86
SH2D4AQ9H788 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.43■□□□□ 0.86
SH2D4AQ9H788 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.43■□□□□ 0.86
SH2D4AQ9H788 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.43■□□□□ 0.86
SH2D4AQ9H788 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
SH2D4AQ9H788 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SH2D4AQ9H788 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.43■□□□□ 0.86
SH2D4AQ9H788 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SH2D4AQ9H788 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.43■□□□□ 0.86
SH2D4AQ9H788 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SH2D4AQ9H788 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SH2D4AQ9H788 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
SH2D4AQ9H788 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SH2D4AQ9H788 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SH2D4AQ9H788 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.43■□□□□ 0.86
SH2D4AQ9H788 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.43■□□□□ 0.86
SH2D4AQ9H788 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SH2D4AQ9H788 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SH2D4AQ9H788 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SH2D4AQ9H788 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SH2D4AQ9H788 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.42■□□□□ 0.86
SH2D4AQ9H788 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SH2D4AQ9H788 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SH2D4AQ9H788 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SH2D4AQ9H788 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SH2D4AQ9H788 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SH2D4AQ9H788 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SH2D4AQ9H788 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.42■□□□□ 0.86
SH2D4AQ9H788 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.42■□□□□ 0.86
SH2D4AQ9H788 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.42■□□□□ 0.86
SH2D4AQ9H788 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
SH2D4AQ9H788 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.42■□□□□ 0.86
SH2D4AQ9H788 AC007967.2-201ENST00000432613 625 ntBASIC20.42■□□□□ 0.86
SH2D4AQ9H788 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SH2D4AQ9H788 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.42■□□□□ 0.86
SH2D4AQ9H788 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.42■□□□□ 0.86
SH2D4AQ9H788 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.42■□□□□ 0.86
SH2D4AQ9H788 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.42■□□□□ 0.86
SH2D4AQ9H788 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.42■□□□□ 0.86
SH2D4AQ9H788 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SH2D4AQ9H788 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SH2D4AQ9H788 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.42■□□□□ 0.86
SH2D4AQ9H788 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms