Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.7■□□□□ 0.26
CNTNAP3Q9BZ76 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNTNAP3Q9BZ76 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNTNAP3Q9BZ76 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CNTNAP3Q9BZ76 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNTNAP3Q9BZ76 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.7■□□□□ 0.26
CNTNAP3Q9BZ76 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.7■□□□□ 0.26
CNTNAP3Q9BZ76 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNTNAP3Q9BZ76 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.69■□□□□ 0.26
CNTNAP3Q9BZ76 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNTNAP3Q9BZ76 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNTNAP3Q9BZ76 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNTNAP3Q9BZ76 PMPCAP1-201ENST00000508114 1576 ntBASIC16.69■□□□□ 0.26
CNTNAP3Q9BZ76 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNTNAP3Q9BZ76 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNTNAP3Q9BZ76 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CNTNAP3Q9BZ76 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNTNAP3Q9BZ76 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNTNAP3Q9BZ76 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNTNAP3Q9BZ76 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CNTNAP3Q9BZ76 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CNTNAP3Q9BZ76 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNTNAP3Q9BZ76 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CNTNAP3Q9BZ76 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.69■□□□□ 0.26
CNTNAP3Q9BZ76 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.69■□□□□ 0.26
CNTNAP3Q9BZ76 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CNTNAP3Q9BZ76 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CNTNAP3Q9BZ76 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.69■□□□□ 0.26
CNTNAP3Q9BZ76 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.69■□□□□ 0.26
CNTNAP3Q9BZ76 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
CNTNAP3Q9BZ76 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNTNAP3Q9BZ76 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.69■□□□□ 0.26
CNTNAP3Q9BZ76 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.69■□□□□ 0.26
CNTNAP3Q9BZ76 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNTNAP3Q9BZ76 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNTNAP3Q9BZ76 AC026471.1-201ENST00000564629 3026 ntBASIC16.69■□□□□ 0.26
CNTNAP3Q9BZ76 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CNTNAP3Q9BZ76 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNTNAP3Q9BZ76 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CNTNAP3Q9BZ76 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNTNAP3Q9BZ76 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 FAM86MP-201ENST00000340703 885 ntBASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 AC092933.1-201ENST00000393644 945 ntBASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 SPDYE21P-201ENST00000413323 827 ntBASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 AC092552.1-201ENST00000547243 906 ntBASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 AC009118.2-201ENST00000613275 655 ntBASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 AP001059.3-201ENST00000619053 235 ntBASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNTNAP3Q9BZ76 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNTNAP3Q9BZ76 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
CNTNAP3Q9BZ76 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
CNTNAP3Q9BZ76 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNTNAP3Q9BZ76 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNTNAP3Q9BZ76 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNTNAP3Q9BZ76 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNTNAP3Q9BZ76 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNTNAP3Q9BZ76 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.67■□□□□ 0.26
CNTNAP3Q9BZ76 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.67■□□□□ 0.26
CNTNAP3Q9BZ76 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.67■□□□□ 0.26
CNTNAP3Q9BZ76 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNTNAP3Q9BZ76 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.67■□□□□ 0.26
CNTNAP3Q9BZ76 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.67■□□□□ 0.26
CNTNAP3Q9BZ76 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.67■□□□□ 0.26
CNTNAP3Q9BZ76 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.67■□□□□ 0.26
CNTNAP3Q9BZ76 AL033527.4-201ENST00000641026 673 ntBASIC16.67■□□□□ 0.26
CNTNAP3Q9BZ76 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CNTNAP3Q9BZ76 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.67■□□□□ 0.26
CNTNAP3Q9BZ76 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CNTNAP3Q9BZ76 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNTNAP3Q9BZ76 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 KRT8P47-201ENST00000604727 1398 ntBASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms