Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC21.31■■□□□ 1
RPAP1Q9BWH6 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
RPAP1Q9BWH6 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC21.31■■□□□ 1
RPAP1Q9BWH6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC21.31■■□□□ 1
RPAP1Q9BWH6 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC21.31■■□□□ 1
RPAP1Q9BWH6 AC139713.2-201ENST00000641328 2723 ntBASIC21.31■■□□□ 1
RPAP1Q9BWH6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.31■■□□□ 1
RPAP1Q9BWH6 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
RPAP1Q9BWH6 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RPAP1Q9BWH6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
RPAP1Q9BWH6 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC21.31■■□□□ 1
RPAP1Q9BWH6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RPAP1Q9BWH6 RPS2P1-201ENST00000434010 821 ntBASIC21.31■■□□□ 1
RPAP1Q9BWH6 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC21.31■■□□□ 1
RPAP1Q9BWH6 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC21.31■■□□□ 1
RPAP1Q9BWH6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC21.31■■□□□ 1
RPAP1Q9BWH6 AC116407.2-201ENST00000613639 860 ntBASIC21.31■■□□□ 1
RPAP1Q9BWH6 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.31■■□□□ 1
RPAP1Q9BWH6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC21.31■■□□□ 1
RPAP1Q9BWH6 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RPAP1Q9BWH6 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RPAP1Q9BWH6 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC21.31■■□□□ 1
RPAP1Q9BWH6 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RPAP1Q9BWH6 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC21.3■■□□□ 1
RPAP1Q9BWH6 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
RPAP1Q9BWH6 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
RPAP1Q9BWH6 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC21.3■■□□□ 1
RPAP1Q9BWH6 HLA-J-201ENST00000462773 1622 ntBASIC21.3■■□□□ 1
RPAP1Q9BWH6 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RPAP1Q9BWH6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC21.3■■□□□ 1
RPAP1Q9BWH6 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RPAP1Q9BWH6 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
RPAP1Q9BWH6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC21.3■■□□□ 1
RPAP1Q9BWH6 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.3■■□□□ 1
RPAP1Q9BWH6 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC21.3■■□□□ 1
RPAP1Q9BWH6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RPAP1Q9BWH6 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RPAP1Q9BWH6 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RPAP1Q9BWH6 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC21.3■■□□□ 1
RPAP1Q9BWH6 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC21.3■■□□□ 1
RPAP1Q9BWH6 AC098831.1-202ENST00000438821 336 ntBASIC21.3■■□□□ 1
RPAP1Q9BWH6 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC21.3■■□□□ 1
RPAP1Q9BWH6 OR7E14P-202ENST00000530490 1290 ntBASIC21.3■■□□□ 1
RPAP1Q9BWH6 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC21.3■■□□□ 1
RPAP1Q9BWH6 AC008735.5-201ENST00000623544 497 ntBASIC21.3■■□□□ 1
RPAP1Q9BWH6 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RPAP1Q9BWH6 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC21.3■■□□□ 1
RPAP1Q9BWH6 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
RPAP1Q9BWH6 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC21.3■■□□□ 1
RPAP1Q9BWH6 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RPAP1Q9BWH6 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.3■■□□□ 1
RPAP1Q9BWH6 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC21.3■■□□□ 1
RPAP1Q9BWH6 MED29-202ENST00000594368 1471 ntTSL 2 BASIC21.3■■□□□ 1
RPAP1Q9BWH6 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC21.3■■□□□ 1
RPAP1Q9BWH6 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC21.3■■□□□ 1
RPAP1Q9BWH6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
RPAP1Q9BWH6 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RPAP1Q9BWH6 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
RPAP1Q9BWH6 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC21.29■■□□□ 1
RPAP1Q9BWH6 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
RPAP1Q9BWH6 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
RPAP1Q9BWH6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RPAP1Q9BWH6 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC21.29■■□□□ 1
RPAP1Q9BWH6 SOD2-201ENST00000337404 991 ntTSL 2 BASIC21.29■■□□□ 1
RPAP1Q9BWH6 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC21.29■■□□□ 1
RPAP1Q9BWH6 LBH-204ENST00000406087 559 ntTSL 4 BASIC21.29■■□□□ 1
RPAP1Q9BWH6 DDX43P3-201ENST00000441064 443 ntBASIC21.29■■□□□ 1
RPAP1Q9BWH6 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC21.29■■□□□ 1
RPAP1Q9BWH6 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC21.29■■□□□ 1
RPAP1Q9BWH6 AC034105.1-201ENST00000563488 319 ntBASIC21.29■■□□□ 1
RPAP1Q9BWH6 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC21.29■■□□□ 1
RPAP1Q9BWH6 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC21.29■■□□□ 1
RPAP1Q9BWH6 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RPAP1Q9BWH6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC21.29■■□□□ 1
RPAP1Q9BWH6 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RPAP1Q9BWH6 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.29■■□□□ 1
RPAP1Q9BWH6 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RPAP1Q9BWH6 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.29■■□□□ 1
RPAP1Q9BWH6 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RPAP1Q9BWH6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPAP1Q9BWH6 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPAP1Q9BWH6 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPAP1Q9BWH6 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPAP1Q9BWH6 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC21.28■■□□□ 1
RPAP1Q9BWH6 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.28■■□□□ 1
RPAP1Q9BWH6 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC21.28■■□□□ 1
RPAP1Q9BWH6 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC21.28■■□□□ 1
RPAP1Q9BWH6 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
RPAP1Q9BWH6 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC21.28■■□□□ 1
RPAP1Q9BWH6 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC21.28■■□□□ 1
RPAP1Q9BWH6 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC21.28■■□□□ 1
RPAP1Q9BWH6 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RPAP1Q9BWH6 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
RPAP1Q9BWH6 AC012640.2-201ENST00000561606 901 ntBASIC21.28■■□□□ 1
RPAP1Q9BWH6 TBC1D3P5-201ENST00000579401 1545 ntBASIC21.28■■□□□ 1
RPAP1Q9BWH6 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC21.28■■□□□ 1
RPAP1Q9BWH6 AC104109.2-201ENST00000602919 1418 ntBASIC21.28■■□□□ 1
RPAP1Q9BWH6 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
RPAP1Q9BWH6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
RPAP1Q9BWH6 FAM197Y3-203ENST00000618346 717 ntBASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms