Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 DFFB-203ENST00000341385 572 ntTSL 5 BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 BMF-207ENST00000559701 630 ntTSL 3 BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 AC011467.2-201ENST00000598425 242 ntBASIC12.26□□□□□ -0.45
UPK3BQ9BT76 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 COMP-202ENST00000425807 2292 ntTSL 2 BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UPK3BQ9BT76 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 WIZP1-201ENST00000531444 2299 ntBASIC12.25□□□□□ -0.45
UPK3BQ9BT76 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 EMD-201ENST00000369835 966 ntTSL 3 BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 SAPCD2P3-201ENST00000455031 850 ntBASIC12.25□□□□□ -0.45
UPK3BQ9BT76 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 UNC93B7-201ENST00000509439 705 ntBASIC12.25□□□□□ -0.45
UPK3BQ9BT76 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 MIR5100-201ENST00000579544 119 ntBASIC12.25□□□□□ -0.45
UPK3BQ9BT76 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 AL121894.2-201ENST00000602977 491 ntBASIC12.25□□□□□ -0.45
UPK3BQ9BT76 AL591684.3-201ENST00000605187 298 ntBASIC12.25□□□□□ -0.45
UPK3BQ9BT76 REXO1L6P-202ENST00000619970 1078 ntBASIC12.25□□□□□ -0.45
UPK3BQ9BT76 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 TP73-AS1-210ENST00000637775 1455 ntBASIC12.25□□□□□ -0.45
UPK3BQ9BT76 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC12.25□□□□□ -0.45
UPK3BQ9BT76 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms