Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PHOX2BQ99453 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.74■□□□□ 0.43
PHOX2BQ99453 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PHOX2BQ99453 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PHOX2BQ99453 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PHOX2BQ99453 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PHOX2BQ99453 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PHOX2BQ99453 COX5BP8-201ENST00000416911 349 ntBASIC17.74■□□□□ 0.43
PHOX2BQ99453 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.74■□□□□ 0.43
PHOX2BQ99453 AC074386.1-202ENST00000463561 864 ntBASIC17.74■□□□□ 0.43
PHOX2BQ99453 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
PHOX2BQ99453 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PHOX2BQ99453 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.74■□□□□ 0.43
PHOX2BQ99453 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PHOX2BQ99453 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.74■□□□□ 0.43
PHOX2BQ99453 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.74■□□□□ 0.43
PHOX2BQ99453 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.74■□□□□ 0.43
PHOX2BQ99453 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.74■□□□□ 0.43
PHOX2BQ99453 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.74■□□□□ 0.43
PHOX2BQ99453 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PHOX2BQ99453 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.74■□□□□ 0.43
PHOX2BQ99453 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.74■□□□□ 0.43
PHOX2BQ99453 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PHOX2BQ99453 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PHOX2BQ99453 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PHOX2BQ99453 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PHOX2BQ99453 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PHOX2BQ99453 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PHOX2BQ99453 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PHOX2BQ99453 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.74■□□□□ 0.43
PHOX2BQ99453 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.73■□□□□ 0.43
PHOX2BQ99453 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PHOX2BQ99453 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PHOX2BQ99453 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PHOX2BQ99453 AC025580.3-201ENST00000617932 1424 ntBASIC17.73■□□□□ 0.43
PHOX2BQ99453 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PHOX2BQ99453 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.73■□□□□ 0.43
PHOX2BQ99453 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.73■□□□□ 0.43
PHOX2BQ99453 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.73■□□□□ 0.43
PHOX2BQ99453 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PHOX2BQ99453 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PHOX2BQ99453 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PHOX2BQ99453 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.73■□□□□ 0.43
PHOX2BQ99453 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PHOX2BQ99453 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.73■□□□□ 0.43
PHOX2BQ99453 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PHOX2BQ99453 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.73■□□□□ 0.43
PHOX2BQ99453 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.73■□□□□ 0.43
PHOX2BQ99453 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.73■□□□□ 0.43
PHOX2BQ99453 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PHOX2BQ99453 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.73■□□□□ 0.43
PHOX2BQ99453 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PHOX2BQ99453 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.73■□□□□ 0.43
PHOX2BQ99453 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
PHOX2BQ99453 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
PHOX2BQ99453 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PHOX2BQ99453 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PHOX2BQ99453 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PHOX2BQ99453 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.73■□□□□ 0.43
PHOX2BQ99453 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PHOX2BQ99453 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PHOX2BQ99453 FZD10-202ENST00000539839 3282 ntBASIC17.73■□□□□ 0.43
PHOX2BQ99453 KRT8P50-201ENST00000562022 1438 ntBASIC17.72■□□□□ 0.43
PHOX2BQ99453 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PHOX2BQ99453 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PHOX2BQ99453 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PHOX2BQ99453 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.72■□□□□ 0.43
PHOX2BQ99453 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PHOX2BQ99453 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PHOX2BQ99453 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
PHOX2BQ99453 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PHOX2BQ99453 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PHOX2BQ99453 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
PHOX2BQ99453 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PHOX2BQ99453 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PHOX2BQ99453 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PHOX2BQ99453 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PHOX2BQ99453 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.72■□□□□ 0.43
PHOX2BQ99453 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PHOX2BQ99453 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PHOX2BQ99453 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PHOX2BQ99453 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PHOX2BQ99453 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PHOX2BQ99453 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PHOX2BQ99453 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.72■□□□□ 0.43
PHOX2BQ99453 AC090142.2-201ENST00000483263 416 ntBASIC17.72■□□□□ 0.43
PHOX2BQ99453 IGHV3-65-201ENST00000523210 341 ntBASIC17.72■□□□□ 0.43
PHOX2BQ99453 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PHOX2BQ99453 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.72■□□□□ 0.43
PHOX2BQ99453 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.72■□□□□ 0.43
PHOX2BQ99453 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.72■□□□□ 0.43
PHOX2BQ99453 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PHOX2BQ99453 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PHOX2BQ99453 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PHOX2BQ99453 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PHOX2BQ99453 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.72■□□□□ 0.43
PHOX2BQ99453 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PHOX2BQ99453 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PHOX2BQ99453 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PHOX2BQ99453 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms