Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
SPENQ96T58 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SPENQ96T58 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
SPENQ96T58 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.71■□□□□ 0.1
SPENQ96T58 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SPENQ96T58 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.71■□□□□ 0.1
SPENQ96T58 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.71■□□□□ 0.1
SPENQ96T58 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.71■□□□□ 0.1
SPENQ96T58 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.71■□□□□ 0.1
SPENQ96T58 AC008761.3-201ENST00000624803 892 ntBASIC15.71■□□□□ 0.1
SPENQ96T58 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SPENQ96T58 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPENQ96T58 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPENQ96T58 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.7■□□□□ 0.1
SPENQ96T58 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.7■□□□□ 0.1
SPENQ96T58 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SPENQ96T58 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPENQ96T58 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.7■□□□□ 0.1
SPENQ96T58 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.7■□□□□ 0.1
SPENQ96T58 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPENQ96T58 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPENQ96T58 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPENQ96T58 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPENQ96T58 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPENQ96T58 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.7■□□□□ 0.1
SPENQ96T58 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SPENQ96T58 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.7■□□□□ 0.1
SPENQ96T58 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPENQ96T58 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SPENQ96T58 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SPENQ96T58 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.7■□□□□ 0.1
SPENQ96T58 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPENQ96T58 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.7■□□□□ 0.1
SPENQ96T58 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
SPENQ96T58 AL627223.1-201ENST00000416693 442 ntBASIC15.7■□□□□ 0.1
SPENQ96T58 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.7■□□□□ 0.1
SPENQ96T58 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPENQ96T58 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPENQ96T58 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPENQ96T58 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.7■□□□□ 0.1
SPENQ96T58 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPENQ96T58 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SPENQ96T58 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
SPENQ96T58 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPENQ96T58 HLA-V-201ENST00000429037 534 ntBASIC15.7■□□□□ 0.1
SPENQ96T58 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SPENQ96T58 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPENQ96T58 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SPENQ96T58 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPENQ96T58 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SPENQ96T58 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SPENQ96T58 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SPENQ96T58 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPENQ96T58 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
SPENQ96T58 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPENQ96T58 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
SPENQ96T58 AL355306.1-201ENST00000415580 579 ntBASIC15.69■□□□□ 0.1
SPENQ96T58 KRT8P48-201ENST00000515599 1220 ntBASIC15.69■□□□□ 0.1
SPENQ96T58 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.69■□□□□ 0.1
SPENQ96T58 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SPENQ96T58 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.69■□□□□ 0.1
SPENQ96T58 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.69■□□□□ 0.1
SPENQ96T58 AF228730.6-201ENST00000641497 218 ntBASIC15.69■□□□□ 0.1
SPENQ96T58 AC084121.3-201ENST00000641716 218 ntBASIC15.69■□□□□ 0.1
SPENQ96T58 AC105233.6-201ENST00000642093 218 ntBASIC15.69■□□□□ 0.1
SPENQ96T58 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPENQ96T58 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPENQ96T58 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SPENQ96T58 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.69■□□□□ 0.1
SPENQ96T58 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPENQ96T58 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPENQ96T58 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPENQ96T58 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPENQ96T58 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPENQ96T58 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SPENQ96T58 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SPENQ96T58 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SPENQ96T58 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.69■□□□□ 0.1
SPENQ96T58 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SPENQ96T58 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPENQ96T58 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SPENQ96T58 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.69■□□□□ 0.1
SPENQ96T58 PMS2P4-201ENST00000412466 1052 ntBASIC15.69■□□□□ 0.1
SPENQ96T58 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.69■□□□□ 0.1
SPENQ96T58 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SPENQ96T58 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.68■□□□□ 0.1
SPENQ96T58 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPENQ96T58 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SPENQ96T58 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.68■□□□□ 0.1
SPENQ96T58 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SPENQ96T58 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPENQ96T58 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPENQ96T58 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPENQ96T58 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SPENQ96T58 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SPENQ96T58 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SPENQ96T58 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.68■□□□□ 0.1
SPENQ96T58 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.68■□□□□ 0.1
SPENQ96T58 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.68■□□□□ 0.1
SPENQ96T58 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms