Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
CASD1Q96PB1 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASD1Q96PB1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASD1Q96PB1 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CASD1Q96PB1 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASD1Q96PB1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASD1Q96PB1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASD1Q96PB1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASD1Q96PB1 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CASD1Q96PB1 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CASD1Q96PB1 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CASD1Q96PB1 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.63■□□□□ 0.57
CASD1Q96PB1 FAM185BP-201ENST00000443595 716 ntBASIC18.63■□□□□ 0.57
CASD1Q96PB1 CYMP-203ENST00000474680 1263 ntBASIC18.63■□□□□ 0.57
CASD1Q96PB1 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CASD1Q96PB1 AP002472.1-201ENST00000577490 586 ntBASIC18.63■□□□□ 0.57
CASD1Q96PB1 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.63■□□□□ 0.57
CASD1Q96PB1 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.63■□□□□ 0.57
CASD1Q96PB1 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.63■□□□□ 0.57
CASD1Q96PB1 AC027612.4-201ENST00000605371 583 ntBASIC18.63■□□□□ 0.57
CASD1Q96PB1 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.63■□□□□ 0.57
CASD1Q96PB1 AC091812.2-201ENST00000619081 385 ntBASIC18.63■□□□□ 0.57
CASD1Q96PB1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASD1Q96PB1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CASD1Q96PB1 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASD1Q96PB1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASD1Q96PB1 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.63■□□□□ 0.57
CASD1Q96PB1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CASD1Q96PB1 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASD1Q96PB1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CASD1Q96PB1 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CASD1Q96PB1 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.63■□□□□ 0.57
CASD1Q96PB1 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.63■□□□□ 0.57
CASD1Q96PB1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASD1Q96PB1 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.62■□□□□ 0.57
CASD1Q96PB1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.62■□□□□ 0.57
CASD1Q96PB1 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.62■□□□□ 0.57
CASD1Q96PB1 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASD1Q96PB1 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASD1Q96PB1 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.62■□□□□ 0.57
CASD1Q96PB1 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.62■□□□□ 0.57
CASD1Q96PB1 ACTG1P14-201ENST00000446382 1122 ntBASIC18.62■□□□□ 0.57
CASD1Q96PB1 PAWRP1-201ENST00000451083 565 ntBASIC18.62■□□□□ 0.57
CASD1Q96PB1 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.62■□□□□ 0.57
CASD1Q96PB1 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
CASD1Q96PB1 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.62■□□□□ 0.57
CASD1Q96PB1 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.62■□□□□ 0.57
CASD1Q96PB1 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.62■□□□□ 0.57
CASD1Q96PB1 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASD1Q96PB1 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASD1Q96PB1 LINC02084-201ENST00000606069 1096 ntBASIC18.62■□□□□ 0.57
CASD1Q96PB1 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.62■□□□□ 0.57
CASD1Q96PB1 AC092902.6-201ENST00000641783 218 ntBASIC18.62■□□□□ 0.57
CASD1Q96PB1 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CASD1Q96PB1 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.62■□□□□ 0.57
CASD1Q96PB1 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CASD1Q96PB1 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CASD1Q96PB1 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.62■□□□□ 0.57
CASD1Q96PB1 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.62■□□□□ 0.57
CASD1Q96PB1 AC138028.4-201ENST00000564984 1845 ntBASIC18.62■□□□□ 0.57
CASD1Q96PB1 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CASD1Q96PB1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASD1Q96PB1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.62■□□□□ 0.57
CASD1Q96PB1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASD1Q96PB1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASD1Q96PB1 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CASD1Q96PB1 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASD1Q96PB1 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASD1Q96PB1 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CASD1Q96PB1 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CASD1Q96PB1 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.61■□□□□ 0.57
CASD1Q96PB1 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CASD1Q96PB1 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CASD1Q96PB1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
CASD1Q96PB1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CASD1Q96PB1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.61■□□□□ 0.57
CASD1Q96PB1 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CASD1Q96PB1 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.61■□□□□ 0.57
CASD1Q96PB1 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CASD1Q96PB1 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CASD1Q96PB1 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CASD1Q96PB1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CASD1Q96PB1 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
CASD1Q96PB1 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CASD1Q96PB1 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.61■□□□□ 0.57
CASD1Q96PB1 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CASD1Q96PB1 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CASD1Q96PB1 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CASD1Q96PB1 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.61■□□□□ 0.57
CASD1Q96PB1 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.61■□□□□ 0.57
CASD1Q96PB1 AL645939.2-201ENST00000427340 991 ntBASIC18.61■□□□□ 0.57
CASD1Q96PB1 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CASD1Q96PB1 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.61■□□□□ 0.57
CASD1Q96PB1 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.61■□□□□ 0.57
CASD1Q96PB1 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CASD1Q96PB1 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CASD1Q96PB1 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.61■□□□□ 0.57
CASD1Q96PB1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CASD1Q96PB1 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.61■□□□□ 0.57
CASD1Q96PB1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms