Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
ZNF558Q96NG5 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.58■□□□□ 0.56
ZNF558Q96NG5 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF558Q96NG5 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.58■□□□□ 0.56
ZNF558Q96NG5 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.58■□□□□ 0.56
ZNF558Q96NG5 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
ZNF558Q96NG5 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF558Q96NG5 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF558Q96NG5 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF558Q96NG5 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.57■□□□□ 0.56
ZNF558Q96NG5 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF558Q96NG5 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF558Q96NG5 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.57■□□□□ 0.56
ZNF558Q96NG5 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
ZNF558Q96NG5 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF558Q96NG5 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.57■□□□□ 0.56
ZNF558Q96NG5 AL590787.1-201ENST00000568856 1315 ntBASIC18.57■□□□□ 0.56
ZNF558Q96NG5 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF558Q96NG5 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF558Q96NG5 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF558Q96NG5 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF558Q96NG5 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF558Q96NG5 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.57■□□□□ 0.56
ZNF558Q96NG5 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.57■□□□□ 0.56
ZNF558Q96NG5 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF558Q96NG5 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
ZNF558Q96NG5 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
ZNF558Q96NG5 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.57■□□□□ 0.56
ZNF558Q96NG5 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF558Q96NG5 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.57■□□□□ 0.56
ZNF558Q96NG5 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.57■□□□□ 0.56
ZNF558Q96NG5 AC091812.2-201ENST00000619081 385 ntBASIC18.57■□□□□ 0.56
ZNF558Q96NG5 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
ZNF558Q96NG5 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.57■□□□□ 0.56
ZNF558Q96NG5 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.57■□□□□ 0.56
ZNF558Q96NG5 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ZNF558Q96NG5 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
ZNF558Q96NG5 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF558Q96NG5 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.57■□□□□ 0.56
ZNF558Q96NG5 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 KRT18P55-202ENST00000578578 1546 ntBASIC18.56■□□□□ 0.56
ZNF558Q96NG5 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 AP000344.2-201ENST00000512987 629 ntBASIC18.56■□□□□ 0.56
ZNF558Q96NG5 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 AC027612.4-201ENST00000605371 583 ntBASIC18.56■□□□□ 0.56
ZNF558Q96NG5 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF558Q96NG5 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF558Q96NG5 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.55■□□□□ 0.56
ZNF558Q96NG5 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.55■□□□□ 0.56
ZNF558Q96NG5 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ZNF558Q96NG5 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
ZNF558Q96NG5 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF558Q96NG5 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.55■□□□□ 0.56
ZNF558Q96NG5 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF558Q96NG5 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF558Q96NG5 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF558Q96NG5 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.55■□□□□ 0.56
ZNF558Q96NG5 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF558Q96NG5 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF558Q96NG5 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF558Q96NG5 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.55■□□□□ 0.56
ZNF558Q96NG5 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms