Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SIPA1Q96FS4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIPA1Q96FS4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIPA1Q96FS4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIPA1Q96FS4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SIPA1Q96FS4 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SIPA1Q96FS4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.59■□□□□ 0.41
SIPA1Q96FS4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIPA1Q96FS4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.59■□□□□ 0.41
SIPA1Q96FS4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIPA1Q96FS4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIPA1Q96FS4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SIPA1Q96FS4 RPS8P6-201ENST00000426177 609 ntBASIC17.59■□□□□ 0.41
SIPA1Q96FS4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.59■□□□□ 0.41
SIPA1Q96FS4 AC108073.2-201ENST00000464002 357 ntBASIC17.59■□□□□ 0.41
SIPA1Q96FS4 RPS15P9-201ENST00000494093 319 ntBASIC17.59■□□□□ 0.41
SIPA1Q96FS4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.59■□□□□ 0.41
SIPA1Q96FS4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.59■□□□□ 0.41
SIPA1Q96FS4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.59■□□□□ 0.41
SIPA1Q96FS4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.59■□□□□ 0.41
SIPA1Q96FS4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.59■□□□□ 0.41
SIPA1Q96FS4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.59■□□□□ 0.41
SIPA1Q96FS4 AC079781.4-201ENST00000641908 219 ntBASIC17.59■□□□□ 0.41
SIPA1Q96FS4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIPA1Q96FS4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SIPA1Q96FS4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIPA1Q96FS4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIPA1Q96FS4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIPA1Q96FS4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
SIPA1Q96FS4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIPA1Q96FS4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
SIPA1Q96FS4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SIPA1Q96FS4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.58■□□□□ 0.41
SIPA1Q96FS4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SIPA1Q96FS4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SIPA1Q96FS4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SIPA1Q96FS4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.58■□□□□ 0.41
SIPA1Q96FS4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
SIPA1Q96FS4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
SIPA1Q96FS4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SIPA1Q96FS4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
SIPA1Q96FS4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SIPA1Q96FS4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.58■□□□□ 0.4
SIPA1Q96FS4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SIPA1Q96FS4 KRT18P2-201ENST00000447938 1258 ntBASIC17.58■□□□□ 0.4
SIPA1Q96FS4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.58■□□□□ 0.4
SIPA1Q96FS4 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.58■□□□□ 0.4
SIPA1Q96FS4 IGHV3-65-201ENST00000523210 341 ntBASIC17.58■□□□□ 0.4
SIPA1Q96FS4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.58■□□□□ 0.4
SIPA1Q96FS4 AC008667.4-201ENST00000607370 168 ntBASIC17.58■□□□□ 0.4
SIPA1Q96FS4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SIPA1Q96FS4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SIPA1Q96FS4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.58■□□□□ 0.4
SIPA1Q96FS4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SIPA1Q96FS4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.58■□□□□ 0.4
SIPA1Q96FS4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
SIPA1Q96FS4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SIPA1Q96FS4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.58■□□□□ 0.4
SIPA1Q96FS4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SIPA1Q96FS4 AC098818.2-201ENST00000564925 2320 ntBASIC17.58■□□□□ 0.4
SIPA1Q96FS4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.4
SIPA1Q96FS4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SIPA1Q96FS4 AP000997.3-201ENST00000623333 2250 ntBASIC17.58■□□□□ 0.4
SIPA1Q96FS4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.58■□□□□ 0.4
SIPA1Q96FS4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SIPA1Q96FS4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SIPA1Q96FS4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SIPA1Q96FS4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.57■□□□□ 0.4
SIPA1Q96FS4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SIPA1Q96FS4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SIPA1Q96FS4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.57■□□□□ 0.4
SIPA1Q96FS4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SIPA1Q96FS4 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.57■□□□□ 0.4
SIPA1Q96FS4 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SIPA1Q96FS4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.57■□□□□ 0.4
SIPA1Q96FS4 VN2R19P-201ENST00000442399 1052 ntBASIC17.57■□□□□ 0.4
SIPA1Q96FS4 AC004967.1-201ENST00000453589 447 ntBASIC17.57■□□□□ 0.4
SIPA1Q96FS4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.57■□□□□ 0.4
SIPA1Q96FS4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.57■□□□□ 0.4
SIPA1Q96FS4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
SIPA1Q96FS4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SIPA1Q96FS4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.57■□□□□ 0.4
SIPA1Q96FS4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SIPA1Q96FS4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.57■□□□□ 0.4
SIPA1Q96FS4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SIPA1Q96FS4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SIPA1Q96FS4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SIPA1Q96FS4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SIPA1Q96FS4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.57■□□□□ 0.4
SIPA1Q96FS4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SIPA1Q96FS4 AC097637.2-201ENST00000624096 1997 ntBASIC17.57■□□□□ 0.4
SIPA1Q96FS4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SIPA1Q96FS4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.57■□□□□ 0.4
SIPA1Q96FS4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SIPA1Q96FS4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
SIPA1Q96FS4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SIPA1Q96FS4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SIPA1Q96FS4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.56■□□□□ 0.4
SIPA1Q96FS4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.56■□□□□ 0.4
SIPA1Q96FS4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms