Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.11■□□□□ 0.49
HDAC11Q96DB2 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.11■□□□□ 0.49
HDAC11Q96DB2 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.11■□□□□ 0.49
HDAC11Q96DB2 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.11■□□□□ 0.49
HDAC11Q96DB2 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.11■□□□□ 0.49
HDAC11Q96DB2 AC069148.1-201ENST00000608741 768 ntBASIC18.11■□□□□ 0.49
HDAC11Q96DB2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.11■□□□□ 0.49
HDAC11Q96DB2 KRT18P1-202ENST00000452408 1331 ntBASIC18.11■□□□□ 0.49
HDAC11Q96DB2 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
HDAC11Q96DB2 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HDAC11Q96DB2 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HDAC11Q96DB2 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.11■□□□□ 0.49
HDAC11Q96DB2 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
HDAC11Q96DB2 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.11■□□□□ 0.49
HDAC11Q96DB2 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HDAC11Q96DB2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.11■□□□□ 0.49
HDAC11Q96DB2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HDAC11Q96DB2 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HDAC11Q96DB2 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HDAC11Q96DB2 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HDAC11Q96DB2 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HDAC11Q96DB2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HDAC11Q96DB2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HDAC11Q96DB2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
HDAC11Q96DB2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
HDAC11Q96DB2 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HDAC11Q96DB2 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.11■□□□□ 0.49
HDAC11Q96DB2 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 AC233702.3-201ENST00000578656 1387 ntBASIC18.1■□□□□ 0.49
HDAC11Q96DB2 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 AC091607.1-201ENST00000490318 1060 ntBASIC18.1■□□□□ 0.49
HDAC11Q96DB2 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 AP005901.3-202ENST00000581653 237 ntBASIC18.1■□□□□ 0.49
HDAC11Q96DB2 AP002414.4-201ENST00000589764 1148 ntBASIC18.1■□□□□ 0.49
HDAC11Q96DB2 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.1■□□□□ 0.49
HDAC11Q96DB2 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
HDAC11Q96DB2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.09■□□□□ 0.49
HDAC11Q96DB2 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HDAC11Q96DB2 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.09■□□□□ 0.49
HDAC11Q96DB2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.09■□□□□ 0.49
HDAC11Q96DB2 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HDAC11Q96DB2 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.09■□□□□ 0.49
HDAC11Q96DB2 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HDAC11Q96DB2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HDAC11Q96DB2 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
HDAC11Q96DB2 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
HDAC11Q96DB2 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HDAC11Q96DB2 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.09■□□□□ 0.49
HDAC11Q96DB2 AC002558.1-201ENST00000488906 803 ntBASIC18.09■□□□□ 0.49
HDAC11Q96DB2 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.09■□□□□ 0.49
HDAC11Q96DB2 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.09■□□□□ 0.49
HDAC11Q96DB2 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.09■□□□□ 0.49
HDAC11Q96DB2 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.09■□□□□ 0.49
HDAC11Q96DB2 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.09■□□□□ 0.49
HDAC11Q96DB2 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
HDAC11Q96DB2 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HDAC11Q96DB2 NPAP1P7-201ENST00000613027 823 ntBASIC18.09■□□□□ 0.49
HDAC11Q96DB2 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HDAC11Q96DB2 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HDAC11Q96DB2 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HDAC11Q96DB2 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
HDAC11Q96DB2 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HDAC11Q96DB2 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HDAC11Q96DB2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HDAC11Q96DB2 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms