Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF25Q96BH1 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF25Q96BH1 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF25Q96BH1 HLA-J-201ENST00000462773 1622 ntBASIC18.54■□□□□ 0.56
RNF25Q96BH1 HBZP1-201ENST00000354915 429 ntBASIC18.54■□□□□ 0.56
RNF25Q96BH1 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF25Q96BH1 IGHGP-201ENST00000390555 1178 ntBASIC18.54■□□□□ 0.56
RNF25Q96BH1 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.54■□□□□ 0.56
RNF25Q96BH1 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.54■□□□□ 0.56
RNF25Q96BH1 AC112907.2-201ENST00000448639 330 ntBASIC18.54■□□□□ 0.56
RNF25Q96BH1 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC18.54■□□□□ 0.56
RNF25Q96BH1 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC18.54■□□□□ 0.56
RNF25Q96BH1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.54■□□□□ 0.56
RNF25Q96BH1 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF25Q96BH1 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
RNF25Q96BH1 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RNF25Q96BH1 AL138688.1-201ENST00000624851 1594 ntBASIC18.54■□□□□ 0.56
RNF25Q96BH1 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF25Q96BH1 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF25Q96BH1 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF25Q96BH1 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
RNF25Q96BH1 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF25Q96BH1 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF25Q96BH1 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF25Q96BH1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF25Q96BH1 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF25Q96BH1 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF25Q96BH1 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF25Q96BH1 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RNF25Q96BH1 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF25Q96BH1 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF25Q96BH1 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF25Q96BH1 MIR662-201ENST00000384847 95 ntBASIC18.53■□□□□ 0.56
RNF25Q96BH1 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.53■□□□□ 0.56
RNF25Q96BH1 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF25Q96BH1 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF25Q96BH1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF25Q96BH1 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF25Q96BH1 KATNBL1P4-201ENST00000503545 918 ntBASIC18.53■□□□□ 0.56
RNF25Q96BH1 AC112698.1-201ENST00000510299 916 ntBASIC18.53■□□□□ 0.56
RNF25Q96BH1 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.53■□□□□ 0.56
RNF25Q96BH1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF25Q96BH1 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF25Q96BH1 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
RNF25Q96BH1 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF25Q96BH1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF25Q96BH1 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RNF25Q96BH1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF25Q96BH1 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.53■□□□□ 0.56
RNF25Q96BH1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF25Q96BH1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF25Q96BH1 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF25Q96BH1 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF25Q96BH1 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF25Q96BH1 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF25Q96BH1 AL353692.3-201ENST00000407031 1396 ntBASIC18.53■□□□□ 0.56
RNF25Q96BH1 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF25Q96BH1 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF25Q96BH1 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF25Q96BH1 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF25Q96BH1 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF25Q96BH1 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
RNF25Q96BH1 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
RNF25Q96BH1 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RNF25Q96BH1 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF25Q96BH1 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF25Q96BH1 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RNF25Q96BH1 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF25Q96BH1 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF25Q96BH1 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF25Q96BH1 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF25Q96BH1 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF25Q96BH1 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.52■□□□□ 0.56
RNF25Q96BH1 DDX43P3-201ENST00000441064 443 ntBASIC18.52■□□□□ 0.56
RNF25Q96BH1 AC104076.2-201ENST00000448912 469 ntBASIC18.52■□□□□ 0.56
RNF25Q96BH1 HOMER2P1-201ENST00000455653 964 ntBASIC18.52■□□□□ 0.56
RNF25Q96BH1 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF25Q96BH1 VENTXP5-201ENST00000523979 775 ntBASIC18.52■□□□□ 0.56
RNF25Q96BH1 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.52■□□□□ 0.56
RNF25Q96BH1 HYMAI.1-201ENST00000620949 238 ntBASIC18.52■□□□□ 0.56
RNF25Q96BH1 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC18.52■□□□□ 0.56
RNF25Q96BH1 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF25Q96BH1 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF25Q96BH1 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.52■□□□□ 0.56
RNF25Q96BH1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.52■□□□□ 0.55
RNF25Q96BH1 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
RNF25Q96BH1 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
RNF25Q96BH1 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF25Q96BH1 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.52■□□□□ 0.55
RNF25Q96BH1 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF25Q96BH1 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF25Q96BH1 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF25Q96BH1 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
RNF25Q96BH1 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF25Q96BH1 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF25Q96BH1 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.51■□□□□ 0.55
RNF25Q96BH1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF25Q96BH1 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF25Q96BH1 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF25Q96BH1 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms