Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 FAM207CP-201ENST00000443486 507 ntBASIC17.43■□□□□ 0.38
CLDN23Q96B33 GAPDHP21-201ENST00000450301 1010 ntBASIC17.43■□□□□ 0.38
CLDN23Q96B33 SLC25A6P2-201ENST00000497974 877 ntBASIC17.43■□□□□ 0.38
CLDN23Q96B33 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDN23Q96B33 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.43■□□□□ 0.38
CLDN23Q96B33 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN23Q96B33 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN23Q96B33 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN23Q96B33 AKAP8P1-201ENST00000434743 1349 ntBASIC17.43■□□□□ 0.38
CLDN23Q96B33 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN23Q96B33 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.42■□□□□ 0.38
CLDN23Q96B33 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN23Q96B33 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.42■□□□□ 0.38
CLDN23Q96B33 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN23Q96B33 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN23Q96B33 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN23Q96B33 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CLDN23Q96B33 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.42■□□□□ 0.38
CLDN23Q96B33 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.42■□□□□ 0.38
CLDN23Q96B33 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.42■□□□□ 0.38
CLDN23Q96B33 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.42■□□□□ 0.38
CLDN23Q96B33 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CLDN23Q96B33 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CLDN23Q96B33 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.42■□□□□ 0.38
CLDN23Q96B33 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.42■□□□□ 0.38
CLDN23Q96B33 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN23Q96B33 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.42■□□□□ 0.38
CLDN23Q96B33 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.42■□□□□ 0.38
CLDN23Q96B33 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN23Q96B33 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
CLDN23Q96B33 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CLDN23Q96B33 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN23Q96B33 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN23Q96B33 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN23Q96B33 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN23Q96B33 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.42■□□□□ 0.38
CLDN23Q96B33 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN23Q96B33 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN23Q96B33 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN23Q96B33 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN23Q96B33 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN23Q96B33 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.42■□□□□ 0.38
CLDN23Q96B33 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN23Q96B33 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN23Q96B33 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.42■□□□□ 0.38
CLDN23Q96B33 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.42■□□□□ 0.38
CLDN23Q96B33 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.41■□□□□ 0.38
CLDN23Q96B33 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.41■□□□□ 0.38
CLDN23Q96B33 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN23Q96B33 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN23Q96B33 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN23Q96B33 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CLDN23Q96B33 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.41■□□□□ 0.38
CLDN23Q96B33 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.41■□□□□ 0.38
CLDN23Q96B33 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.41■□□□□ 0.38
CLDN23Q96B33 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.41■□□□□ 0.38
CLDN23Q96B33 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.41■□□□□ 0.38
CLDN23Q96B33 AC107890.1-201ENST00000422478 521 ntBASIC17.41■□□□□ 0.38
CLDN23Q96B33 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.41■□□□□ 0.38
CLDN23Q96B33 AC087163.2-201ENST00000457299 853 ntBASIC17.41■□□□□ 0.38
CLDN23Q96B33 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.41■□□□□ 0.38
CLDN23Q96B33 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN23Q96B33 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.41■□□□□ 0.38
CLDN23Q96B33 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN23Q96B33 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.41■□□□□ 0.38
CLDN23Q96B33 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.41■□□□□ 0.38
CLDN23Q96B33 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.41■□□□□ 0.38
CLDN23Q96B33 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.41■□□□□ 0.38
CLDN23Q96B33 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN23Q96B33 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN23Q96B33 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CLDN23Q96B33 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN23Q96B33 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CLDN23Q96B33 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN23Q96B33 AC116562.4-201ENST00000641316 2276 ntBASIC17.41■□□□□ 0.38
CLDN23Q96B33 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN23Q96B33 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN23Q96B33 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CLDN23Q96B33 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN23Q96B33 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.4■□□□□ 0.38
CLDN23Q96B33 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN23Q96B33 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CLDN23Q96B33 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN23Q96B33 UGT1A2P-201ENST00000454886 866 ntBASIC17.4■□□□□ 0.38
CLDN23Q96B33 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.4■□□□□ 0.38
CLDN23Q96B33 AC140878.1-201ENST00000565277 250 ntBASIC17.4■□□□□ 0.38
CLDN23Q96B33 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.4■□□□□ 0.38
CLDN23Q96B33 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.4■□□□□ 0.38
CLDN23Q96B33 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN23Q96B33 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN23Q96B33 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN23Q96B33 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN23Q96B33 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN23Q96B33 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN23Q96B33 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CLDN23Q96B33 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
CLDN23Q96B33 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CLDN23Q96B33 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CLDN23Q96B33 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN23Q96B33 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms