Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.89■□□□□ 0.61
SEMA4DQ92854 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA4DQ92854 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA4DQ92854 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA4DQ92854 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA4DQ92854 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA4DQ92854 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA4DQ92854 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.89■□□□□ 0.61
SEMA4DQ92854 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA4DQ92854 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA4DQ92854 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SEMA4DQ92854 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA4DQ92854 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA4DQ92854 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA4DQ92854 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.88■□□□□ 0.61
SEMA4DQ92854 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SEMA4DQ92854 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA4DQ92854 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SEMA4DQ92854 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA4DQ92854 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA4DQ92854 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.88■□□□□ 0.61
SEMA4DQ92854 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.88■□□□□ 0.61
SEMA4DQ92854 NUS1P1-201ENST00000446295 882 ntBASIC18.88■□□□□ 0.61
SEMA4DQ92854 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA4DQ92854 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.88■□□□□ 0.61
SEMA4DQ92854 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.88■□□□□ 0.61
SEMA4DQ92854 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
SEMA4DQ92854 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.88■□□□□ 0.61
SEMA4DQ92854 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA4DQ92854 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.88■□□□□ 0.61
SEMA4DQ92854 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA4DQ92854 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.88■□□□□ 0.61
SEMA4DQ92854 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA4DQ92854 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA4DQ92854 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA4DQ92854 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.88■□□□□ 0.61
SEMA4DQ92854 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.88■□□□□ 0.61
SEMA4DQ92854 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.88■□□□□ 0.61
SEMA4DQ92854 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.88■□□□□ 0.61
SEMA4DQ92854 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SEMA4DQ92854 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SEMA4DQ92854 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SEMA4DQ92854 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.88■□□□□ 0.61
SEMA4DQ92854 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.88■□□□□ 0.61
SEMA4DQ92854 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SEMA4DQ92854 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SEMA4DQ92854 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SEMA4DQ92854 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SEMA4DQ92854 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA4DQ92854 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA4DQ92854 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA4DQ92854 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SEMA4DQ92854 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA4DQ92854 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA4DQ92854 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA4DQ92854 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA4DQ92854 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA4DQ92854 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA4DQ92854 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA4DQ92854 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA4DQ92854 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA4DQ92854 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA4DQ92854 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.87■□□□□ 0.61
SEMA4DQ92854 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.87■□□□□ 0.61
SEMA4DQ92854 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.87■□□□□ 0.61
SEMA4DQ92854 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA4DQ92854 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA4DQ92854 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.87■□□□□ 0.61
SEMA4DQ92854 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.87■□□□□ 0.61
SEMA4DQ92854 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
SEMA4DQ92854 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.87■□□□□ 0.61
SEMA4DQ92854 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.87■□□□□ 0.61
SEMA4DQ92854 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA4DQ92854 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA4DQ92854 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA4DQ92854 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA4DQ92854 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA4DQ92854 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.87■□□□□ 0.61
SEMA4DQ92854 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA4DQ92854 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.86■□□□□ 0.61
SEMA4DQ92854 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA4DQ92854 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA4DQ92854 AL023806.1-201ENST00000603994 1649 ntBASIC18.86■□□□□ 0.61
SEMA4DQ92854 PMPCAP1-201ENST00000508114 1576 ntBASIC18.86■□□□□ 0.61
SEMA4DQ92854 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA4DQ92854 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA4DQ92854 AC012313.1-201ENST00000593393 3059 ntBASIC18.86■□□□□ 0.61
SEMA4DQ92854 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SEMA4DQ92854 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SEMA4DQ92854 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SEMA4DQ92854 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.86■□□□□ 0.61
SEMA4DQ92854 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.86■□□□□ 0.61
SEMA4DQ92854 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA4DQ92854 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SEMA4DQ92854 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA4DQ92854 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.86■□□□□ 0.61
SEMA4DQ92854 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.86■□□□□ 0.61
SEMA4DQ92854 KRT16P4-201ENST00000453883 522 ntBASIC18.86■□□□□ 0.61
SEMA4DQ92854 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.86■□□□□ 0.61
SEMA4DQ92854 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms