Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.8■□□□□ 0.76
USP6NLQ92738 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
USP6NLQ92738 AC022145.2-201ENST00000598203 171 ntBASIC19.8■□□□□ 0.76
USP6NLQ92738 AC093512.1-201ENST00000617969 520 ntBASIC19.8■□□□□ 0.76
USP6NLQ92738 REXO1L3P-201ENST00000622202 1288 ntBASIC19.8■□□□□ 0.76
USP6NLQ92738 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP6NLQ92738 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP6NLQ92738 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
USP6NLQ92738 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
USP6NLQ92738 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.8■□□□□ 0.76
USP6NLQ92738 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP6NLQ92738 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.79■□□□□ 0.76
USP6NLQ92738 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP6NLQ92738 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP6NLQ92738 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
USP6NLQ92738 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.79■□□□□ 0.76
USP6NLQ92738 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP6NLQ92738 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
USP6NLQ92738 AC100803.2-201ENST00000562459 1963 ntBASIC19.79■□□□□ 0.76
USP6NLQ92738 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP6NLQ92738 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP6NLQ92738 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP6NLQ92738 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
USP6NLQ92738 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.79■□□□□ 0.76
USP6NLQ92738 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP6NLQ92738 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP6NLQ92738 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.79■□□□□ 0.76
USP6NLQ92738 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.79■□□□□ 0.76
USP6NLQ92738 COX20P2-201ENST00000452636 358 ntBASIC19.79■□□□□ 0.76
USP6NLQ92738 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.79■□□□□ 0.76
USP6NLQ92738 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.79■□□□□ 0.76
USP6NLQ92738 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP6NLQ92738 IGHV3-52-201ENST00000519770 353 ntBASIC19.79■□□□□ 0.76
USP6NLQ92738 AC109322.1-201ENST00000524499 1264 ntBASIC19.79■□□□□ 0.76
USP6NLQ92738 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.79■□□□□ 0.76
USP6NLQ92738 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.79■□□□□ 0.76
USP6NLQ92738 AC004449.1-201ENST00000564240 433 ntBASIC19.79■□□□□ 0.76
USP6NLQ92738 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.79■□□□□ 0.76
USP6NLQ92738 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.79■□□□□ 0.76
USP6NLQ92738 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP6NLQ92738 AC068137.2-201ENST00000605408 478 ntBASIC19.79■□□□□ 0.76
USP6NLQ92738 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP6NLQ92738 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.79■□□□□ 0.76
USP6NLQ92738 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.79■□□□□ 0.76
USP6NLQ92738 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
USP6NLQ92738 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP6NLQ92738 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.79■□□□□ 0.76
USP6NLQ92738 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.79■□□□□ 0.76
USP6NLQ92738 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP6NLQ92738 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
USP6NLQ92738 AL590787.1-201ENST00000568856 1315 ntBASIC19.78■□□□□ 0.76
USP6NLQ92738 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.78■□□□□ 0.76
USP6NLQ92738 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP6NLQ92738 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.78■□□□□ 0.76
USP6NLQ92738 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP6NLQ92738 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.78■□□□□ 0.76
USP6NLQ92738 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.78■□□□□ 0.76
USP6NLQ92738 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.78■□□□□ 0.76
USP6NLQ92738 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
USP6NLQ92738 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
USP6NLQ92738 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
USP6NLQ92738 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.78■□□□□ 0.76
USP6NLQ92738 FAM185BP-201ENST00000443595 716 ntBASIC19.78■□□□□ 0.76
USP6NLQ92738 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.78■□□□□ 0.76
USP6NLQ92738 AC002558.1-201ENST00000488906 803 ntBASIC19.78■□□□□ 0.76
USP6NLQ92738 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.78■□□□□ 0.76
USP6NLQ92738 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.78■□□□□ 0.76
USP6NLQ92738 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.78■□□□□ 0.76
USP6NLQ92738 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP6NLQ92738 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
USP6NLQ92738 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.78■□□□□ 0.76
USP6NLQ92738 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.78■□□□□ 0.76
USP6NLQ92738 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP6NLQ92738 AL138781.2-201ENST00000617896 1843 ntBASIC19.78■□□□□ 0.76
USP6NLQ92738 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
USP6NLQ92738 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP6NLQ92738 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.78■□□□□ 0.76
USP6NLQ92738 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP6NLQ92738 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
USP6NLQ92738 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
USP6NLQ92738 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.77■□□□□ 0.76
USP6NLQ92738 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP6NLQ92738 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP6NLQ92738 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
USP6NLQ92738 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
USP6NLQ92738 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP6NLQ92738 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP6NLQ92738 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP6NLQ92738 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
USP6NLQ92738 AC009949.1-201ENST00000623048 1830 ntBASIC19.77■□□□□ 0.76
USP6NLQ92738 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
USP6NLQ92738 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP6NLQ92738 ADH5P3-201ENST00000433842 1137 ntBASIC19.77■□□□□ 0.76
USP6NLQ92738 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.77■□□□□ 0.76
USP6NLQ92738 PAWRP1-201ENST00000451083 565 ntBASIC19.77■□□□□ 0.76
USP6NLQ92738 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.77■□□□□ 0.76
USP6NLQ92738 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
USP6NLQ92738 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.77■□□□□ 0.76
USP6NLQ92738 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
USP6NLQ92738 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms