Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
AP3S1Q92572 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
AP3S1Q92572 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP3S1Q92572 HOXB1-202ENST00000577092 1414 ntBASIC15.52■□□□□ 0.08
AP3S1Q92572 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.52■□□□□ 0.08
AP3S1Q92572 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP3S1Q92572 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
AP3S1Q92572 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
AP3S1Q92572 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.52■□□□□ 0.08
AP3S1Q92572 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.52■□□□□ 0.08
AP3S1Q92572 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.52■□□□□ 0.08
AP3S1Q92572 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP3S1Q92572 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP3S1Q92572 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP3S1Q92572 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.52■□□□□ 0.08
AP3S1Q92572 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP3S1Q92572 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP3S1Q92572 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.52■□□□□ 0.08
AP3S1Q92572 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP3S1Q92572 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP3S1Q92572 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP3S1Q92572 AC116353.5-201ENST00000638148 1699 ntBASIC15.52■□□□□ 0.08
AP3S1Q92572 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP3S1Q92572 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
AP3S1Q92572 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.52■□□□□ 0.08
AP3S1Q92572 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP3S1Q92572 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP3S1Q92572 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP3S1Q92572 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC15.52■□□□□ 0.08
AP3S1Q92572 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC15.52■□□□□ 0.08
AP3S1Q92572 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC15.52■□□□□ 0.08
AP3S1Q92572 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC15.52■□□□□ 0.08
AP3S1Q92572 MIR4758-201ENST00000577688 71 ntBASIC15.52■□□□□ 0.08
AP3S1Q92572 AC011298.2-201ENST00000617989 482 ntBASIC15.52■□□□□ 0.08
AP3S1Q92572 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
AP3S1Q92572 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.52■□□□□ 0.08
AP3S1Q92572 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
AP3S1Q92572 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
AP3S1Q92572 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP3S1Q92572 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.52■□□□□ 0.07
AP3S1Q92572 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP3S1Q92572 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.52■□□□□ 0.07
AP3S1Q92572 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.52■□□□□ 0.07
AP3S1Q92572 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP3S1Q92572 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP3S1Q92572 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP3S1Q92572 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP3S1Q92572 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP3S1Q92572 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
AP3S1Q92572 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP3S1Q92572 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP3S1Q92572 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
AP3S1Q92572 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP3S1Q92572 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.52■□□□□ 0.07
AP3S1Q92572 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP3S1Q92572 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP3S1Q92572 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.51■□□□□ 0.07
AP3S1Q92572 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
AP3S1Q92572 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP3S1Q92572 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP3S1Q92572 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
AP3S1Q92572 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
AP3S1Q92572 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP3S1Q92572 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP3S1Q92572 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.51■□□□□ 0.07
AP3S1Q92572 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP3S1Q92572 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.51■□□□□ 0.07
AP3S1Q92572 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
AP3S1Q92572 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
AP3S1Q92572 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP3S1Q92572 METTL15-202ENST00000403099 795 ntTSL 5 BASIC15.51■□□□□ 0.07
AP3S1Q92572 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.51■□□□□ 0.07
AP3S1Q92572 FAM207BP-201ENST00000447172 505 ntBASIC15.51■□□□□ 0.07
AP3S1Q92572 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP3S1Q92572 KRT16P5-201ENST00000455284 522 ntBASIC15.51■□□□□ 0.07
AP3S1Q92572 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15.51■□□□□ 0.07
AP3S1Q92572 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP3S1Q92572 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC15.51■□□□□ 0.07
AP3S1Q92572 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.51■□□□□ 0.07
AP3S1Q92572 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15.51■□□□□ 0.07
AP3S1Q92572 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP3S1Q92572 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP3S1Q92572 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.51■□□□□ 0.07
AP3S1Q92572 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.51■□□□□ 0.07
AP3S1Q92572 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP3S1Q92572 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP3S1Q92572 AC092068.3-201ENST00000587894 2016 ntBASIC15.51■□□□□ 0.07
AP3S1Q92572 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
AP3S1Q92572 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
AP3S1Q92572 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP3S1Q92572 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
AP3S1Q92572 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP3S1Q92572 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP3S1Q92572 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
AP3S1Q92572 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
AP3S1Q92572 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP3S1Q92572 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP3S1Q92572 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
AP3S1Q92572 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
AP3S1Q92572 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms