Protein–RNA interactions for Protein: Q8WUY9

DEPDC1B, DEP domain-containing protein 1B, humanhuman

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1BQ8WUY9 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.64■□□□□ 0.57
DEPDC1BQ8WUY9 KRT18P65-201ENST00000439811 1286 ntBASIC18.64■□□□□ 0.57
DEPDC1BQ8WUY9 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.64■□□□□ 0.57
DEPDC1BQ8WUY9 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
DEPDC1BQ8WUY9 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.64■□□□□ 0.57
DEPDC1BQ8WUY9 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.64■□□□□ 0.57
DEPDC1BQ8WUY9 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DEPDC1BQ8WUY9 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DEPDC1BQ8WUY9 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
DEPDC1BQ8WUY9 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DEPDC1BQ8WUY9 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.64■□□□□ 0.57
DEPDC1BQ8WUY9 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
DEPDC1BQ8WUY9 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DEPDC1BQ8WUY9 AP005117.1-201ENST00000584346 1413 ntBASIC18.64■□□□□ 0.57
DEPDC1BQ8WUY9 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
DEPDC1BQ8WUY9 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DEPDC1BQ8WUY9 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 ABCD1P5-201ENST00000445663 754 ntBASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 POLD2P1-201ENST00000511220 997 ntBASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 TERC-201ENST00000602385 541 ntBASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DEPDC1BQ8WUY9 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.62■□□□□ 0.57
DEPDC1BQ8WUY9 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DEPDC1BQ8WUY9 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.62■□□□□ 0.57
DEPDC1BQ8WUY9 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DEPDC1BQ8WUY9 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DEPDC1BQ8WUY9 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
DEPDC1BQ8WUY9 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DEPDC1BQ8WUY9 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
DEPDC1BQ8WUY9 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
DEPDC1BQ8WUY9 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DEPDC1BQ8WUY9 HNRNPDP1-201ENST00000439535 754 ntBASIC18.62■□□□□ 0.57
DEPDC1BQ8WUY9 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.62■□□□□ 0.57
DEPDC1BQ8WUY9 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DEPDC1BQ8WUY9 AC092865.5-201ENST00000545435 363 ntBASIC18.62■□□□□ 0.57
DEPDC1BQ8WUY9 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.62■□□□□ 0.57
DEPDC1BQ8WUY9 AC116407.3-201ENST00000623905 1129 ntBASIC18.62■□□□□ 0.57
DEPDC1BQ8WUY9 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
DEPDC1BQ8WUY9 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DEPDC1BQ8WUY9 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.62■□□□□ 0.57
DEPDC1BQ8WUY9 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DEPDC1BQ8WUY9 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DEPDC1BQ8WUY9 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DEPDC1BQ8WUY9 LINC00602-201ENST00000629776 2065 ntBASIC18.62■□□□□ 0.57
DEPDC1BQ8WUY9 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DEPDC1BQ8WUY9 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.62■□□□□ 0.57
DEPDC1BQ8WUY9 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.62■□□□□ 0.57
DEPDC1BQ8WUY9 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
DEPDC1BQ8WUY9 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DEPDC1BQ8WUY9 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DEPDC1BQ8WUY9 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
DEPDC1BQ8WUY9 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DEPDC1BQ8WUY9 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DEPDC1BQ8WUY9 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DEPDC1BQ8WUY9 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DEPDC1BQ8WUY9 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
DEPDC1BQ8WUY9 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
DEPDC1BQ8WUY9 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
DEPDC1BQ8WUY9 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
DEPDC1BQ8WUY9 AP000997.3-201ENST00000623333 2250 ntBASIC18.61■□□□□ 0.57
DEPDC1BQ8WUY9 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.61■□□□□ 0.57
DEPDC1BQ8WUY9 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.61■□□□□ 0.57
DEPDC1BQ8WUY9 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms